Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Lung transcriptome sequencing of Tibetan sheep

PROVIDER: PRJNA778823 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16878507_1.fastq.gz	Fastqsanger.gz
	SRR16878507_2.fastq.gz	Fastqsanger.gz
	SRR16878508_1.fastq.gz	Fastqsanger.gz
	SRR16878508_2.fastq.gz	Fastqsanger.gz
	SRR16878509_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Project description:Tibetan sheep transcriptome sequencing

| PRJNA1136802 | ENA

Lung proteome sequencing of Tibetan sheep

Project description:To reveal the protein expression patterns in Tibetan sheep lungs at different altitudes, proteome sequencing was performed in this study.

2021-12-30 | PXD030661 |

Project description:Tibetan Sheep analysis

| PRJNA1066079 | ENA

Project description:Tibetan sheep resequencing

| PRJNA1111723 | ENA

Bacillus velezensis strain:Tibetan sheep feces | isolate:Tibetan sheep feces

Project description:Bacillus velezensis strain:Tibetan sheep feces | isolate:Tibetan sheep feces Genome sequencing

| PRJNA967840 | ENA

Project description:Tibetan sheep gut samples sequencing

| PRJNA657975 | ENA

Project description:WGS of Tibetan sheep

| PRJNA797957 | ENA

Project description:Transcriptome sequencing of early embryonic development in Tibetan sheep

| PRJNA1207713 | ENA

iTRAQ-based Proteomics Reveals Candidate Proteins of Fat Deposition in Chinese Indigenous Sheep with Morphologically Different Tails

Project description:Chinese indigenous sheep can be classified into two types according to their tail morphology: fat-rumped and thin-tailed sheep, of which the typical breeds are Altay sheep and Tibetan sheep, respectively. To identify the differentially expressed proteins (DEPs) underlying the phenotypic differences between tail types, we used iTRAQ combined with multi-dimensional liquid chromatography tandem mass spectrometry (LC-MS/MS) technology to detect candidate proteins. We then subjected these to a database search, and identified the DEPs. Finally, bioinformatics technology was used to carry out GO functional and KEGG pathway analyses. A total of 3248 proteins were identified, of which 44 were up-regulated and 40 were down-regulated DEPs. Analyzing their GO function terms and KEGG pathways revealed that the functions of these DEPs are mainly binding, catalytic activity, structural molecule activity, molecular function regulator, and transporter activity. Among the genes encoding the DEPs, APOA2, GALK1, ADIPOQ, and NDUFS4 are associated with fat formation and metabolism.

2022-02-17 | PXD029488 | Pride

Proteome in Tibetan sheep testes

Project description:We obtained comprehensive protein profiles from testes of Tibetan sheep at three developmental stages (including pre-puberty, post-puberty and adulthood) using data-independent acquisition-based proteomic strategy to quantitatively identify the differentially abundant proteins (DAPs) associated with testicular development and function and to unravel the molecular basis of spermatogenesis in Tibetan sheep.

2022-04-08 | PXD033098 |

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data