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Soil 16S rRNA across China

ABSTRACT: Soil 16S rRNA across China Raw sequence reads

PROVIDER: PRJNA779595 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR16949200.fastq.gz	Fastqsanger.gz
	SRR16949300.fastq.gz	Fastqsanger.gz
	SRR16950100.fastq.gz	Fastqsanger.gz
	SRR16950200.fastq.gz	Fastqsanger.gz
	SRR16949201.fastq.gz	Fastqsanger.gz

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Project description:Investigation of the phylogenetic diversity of Acidobacteria taxa using PCR amplicons from positive control 16S rRNA templates and total genomic DNA extracted from soil and a soil clay fraction A ten chip study using PCR amplicons from cloned 16S rRNA genes and from diverse soil 16S rRNAs, with PCR primers specific to the Division Acidobacteria. Each chip measures the signal from 42,194 probes (in triplicate) targeting Acidobacteria division, subdivision, and subclades as well as other bacterial phyla. All samples except one (GSM464591) include 2.5 M betaine in the hybridization buffer. Pair files lost due to a computer crash.

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