Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Myxobolus honghuensis

ABSTRACT: Myxobolus honghuensis PacBio genome sequencing and assembly

PROVIDER: PRJNA779846 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17012500_subreads.fastq.gz	Fastqsanger.gz
	SRR17012501_subreads.fastq.gz	Fastqsanger.gz
	SRR17012502_subreads.fastq.gz	Fastqsanger.gz
	SRR17012503_subreads.fastq.gz	Fastqsanger.gz
	SRR17012504_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 17

Similar Datasets

Myxobolus honghuensis

Project description:Myxobolus honghuensis Illumina genome sequencing and assembly

| PRJNA778632 | ENA

Myxobolus honghuensis

Project description:Myxobolus honghuensis overview

| PRJNA802944 | ENA

Myxobolus honghuensis

Project description:Whole genome sequencing of Myxobolus honghuensis

| PRJEB53883 | ENA

Myxobolus honghuensis

Project description:Myxobolus honghuensis transcriptome sequencing for genomic analysis

| PRJNA779260 | ENA

Myxobolus honghuensis

Project description:Myxobolus honghuensis transcriptome sequencing for evolutionary and phylogenetic analyses

| PRJNA786091 | ENA

Myxobolus wulii

Project description:Myxobolus wulii Illumina genome sequencing and assembly

| PRJNA786089 | ENA

Myxobolus cerebralis

Project description:Myxobolus cerebralis Genome sequencing

| PRJNA182728 | ENA

Myxobolus wulii

Project description:Whole genome sequencing of Myxobolus wulii

| PRJEB53885 | ENA

Myxobolus shantungensis

Project description:Whole genome sequencing of Myxobolus shantungensis

| PRJEB53884 | ENA

Remarks on the validity of Myxobolus ampullicapsulatus and Myxobolus honghuensis (Myxozoa: Myxosporea) based on SSU rDNA sequences.

Project description:In the present study, we isolated three populations of Myxobolus ampullicapsulatus from the gills of crucian carp, Carassius auratus auratus, two from Yongchuan, Chongqing area and one from Poyang Lake, Jiangxi area, China, sequenced their complete small subunit ribosome RNA gene, analyzed their genetic distance and gene similarity, and explored their relationship based on Bayesian inference and maximum likelihood analyses of their small subunit ribosomal DNA. The results combined with their morphological characteristics suggest that M. ampullicapsulatus infecting the gills and pharynx of allogynogenetic gibel carp, Carassius auratus gibelio, should be Myxobolus honghuensis. This study highlights the importance of DNA sequence comparisons for distinguishing Myxobolus species and indicates that the intra-species identification for the two Myxobolus species mentioned in the present research should be less than ten variation sites. In morphology, M. honghuensis Liu et al. (2012) parasitic on the gills of C. auratus auratus (goldfish) was collected from Chongqing area, and its mature spore was 16.5-19.5 × 8.5-10.0 μm in size, polar capsule was 7.0-10.0 × 2.5-4.0 μm in size, and polar filament had 9-10 coils. M. honghuensis Liu et al. (2012) isolated from the pharynx of C. auratus gibelio was sampled in Hubei area, and its mature spore was 15.1-19.5 × 9.0-11.3 μm in size, polar capsule was 7.9-8.1 × 3.0-4.5 μm in size, and polar filament had 7-8 coils.

| S-EPMC3825597 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data