Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-sequencing results of five samples across three YMC cycles of both wt and yaf9W89A strains

ABSTRACT: RNA-sequencing results of five samples across three YMC cycles of both wt and yaf9W89A strains

PROVIDER: PRJNA781537 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16975004.fastq.gz	Fastqsanger.gz
	SRR16975005.fastq.gz	Fastqsanger.gz
	SRR16975006.fastq.gz	Fastqsanger.gz
	SRR16975007.fastq.gz	Fastqsanger.gz
	SRR16975008.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

RNA-sequencing results of five samples across three YMC cycles of both wt and yaf9W89A strains

Project description:The goal of the experiments is to study how the absence of Yaf9-H3 acyl reading affected metabolic and global gene transcription. We performed RNA-seq for our wt and yaf9W89A cells across three consecutive YMC cycles. We found that HOC genes maintained expression in the LOC phase and that LOC genes were not properly expressed in the LOC phase.

2021-11-20 | GSE189089 | GEO

Streptococcus phage YMC-2011

Project description:Streptococcus phage YMC-2011

| PRJNA68675 | ENA

AMFc propagation cycles

Project description:AMFc propagation cycles

| PRJEB71400 | ENA

Leonurus japonicus cultivar:YMC-01

Project description:Leonurus japonicus cultivar:YMC-01 Genome sequencing

| PRJNA674741 | ENA

Colonic and cecal microbiome profiles in response to different environmental light-dark cycles

Project description:It is well known that host-microbes and immunity interactions are influenced by dietary patterns, as well as daily environmental light-dark (LD) cycles that entrain circadian rhythms in the host. Emerging data has highlighted the importance of diet patterns and timing on the interaction among circadian rhythms, gut microbiome, and immunity, however, their impacts on LD cycles are less reported. Therefore, we aim to study how LD cycles regulate the homeostatic crosstalk between gut microbiome, hypothalamic and hepatic circadian clock oscillations and immunity. We hypothesized that different environmental LD cycles: (1) constant darkness, LD0/24; (2) short light, LD8/16; (3) normal LD cycle, LD12/12; (4) long light, LD16/8; and (5) constant light, LD24/0, may affect immunity and metabolism to varying degrees. Therefore, 240 mice were managed with chow diets (CD) and antibiotics treatments (ABX) under five different LD cycles for 42 days. The colonic (co) and cecum (ce) contents were obtained for studying their impacts on gut microbiome using 16S rRNA sequencing.

2023-03-10 | GSE226852 | GEO

Escherichia coli strain:YMC/2017/02/MS631

Project description:Escherichia coli strain:YMC/2017/02/MS631 Genome sequencing

| PRJNA513925 | ENA

Escherichia coli strain:YMC/2017/02/MS631

Project description:Escherichia coli strain:YMC/2017/02/MS631 Genome sequencing

| PRJNA513924 | ENA

Pseudomonas aeruginosa strain:YMC/2012/03/U3774

Project description:Pseudomonas aeruginosa strain:YMC/2012/03/U3774 Genome sequencing

| PRJNA655766 | ENA

Escherichia coli strain:YMC/2017/02/MS631

Project description:Escherichia coli strain:YMC/2017/02/MS631 Genome sequencing