Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Pregnant sow gut metagenome Raw sequence reads

ABSTRACT: pregnant sow gut metagenome Raw sequence reads

PROVIDER: PRJNA782064 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

pregnant sow gut metagenome Raw sequence reads2.0

Project description:pregnant sow gut metagenome Raw sequence reads2.0 Raw sequence reads

| PRJNA782075 | ENA

Mouse gut and human gut xenograft - PBS control vs Lipopolysaccharide (LPS) treated raw sequence reads

Project description:Background: Gastrointestinal symptoms in COVID-19 patients suggests that the gut may present a viral target organ. Disease development and severity is dependent on viral interaction with two cell surface human proteins, ACE2 and TMPRSS2, and on antiviral response which may lead to systemic hyperinflammatory syndrome and multiorgan dysfunction Understanding the host response to SARS-CoV-2 infection and the pathology of the disease will be greatly enhanced by the development of appropriate animal models. However, the virus does not grow in wild type mice and only induced mild disease in transgenic animals expressing human ACE2. Results: As there are known differences between immune response in laboratory mice and humans, the response of human gut developed as xenografts and host mouse gut following systemic LPS injections as a hyperinflammation model system was evaluated. Gene set enrichment analysis of significantly upregulated human and mouse genes revealed that a number of inflammatory and immune response pathways are commonly regulated in the two species. However, species differences were also observed. The analysis shows that the intestinal immune response to inflammation in humans and mice are generally very similar. However, certain human-specific diseases, such as COVID-19, can only be successfully studied in an experimental model of human tissue, such as the gut xenograft

2022-06-01 | GSE180795 | GEO

mouse gut metagenome Raw sequence reads

Project description:mouse gut metagenome Raw sequence reads Metagenome

| PRJNA476206 | ENA

chicken gut metagenome Raw sequence reads

Project description:chicken gut metagenome-2 Raw sequence reads

| PRJNA745253 | ENA

Expression data from Porcine pregnant

Project description:Gene differential expression in different pregnant periods and different tissues are detected. Sow ovary and myometrium were selected for RNA extraction and hybridization on Affymetrix microarrays. 9 pigs were divided into three time-points groups: non-pregnant (NP, n=3), early pregnant (EP, n=3), and late pregnant (LP, n=3). The differentially expressed genes in each group were identified.

2012-06-30 | E-GEOD-32438 | biostudies-arrayexpress

Mouse gut metagenome Raw sequence reads

Project description:Mouse gut metagenome Raw sequence reads Targeted loci environmental

| PRJNA1035793 | ENA

pig gut metagenome Raw sequence reads

Project description:pig gut metagenome Raw sequence reads Raw sequence reads

| PRJNA604750 | ENA

Sow metagenome

Project description:Sow metagenome Raw sequence reads

| PRJNA1137406 | ENA

Mouse gut content Raw sequence reads

Project description:Mouse gut content Raw sequence reads