Project description:We examined 36 biopsies taken from digital dermatitis lesions of Holstein cows. The target was the V3 -V4 variable region of 16S rRNA using Treponema specific primers. We identified 20 different taxa of Treponema using this approach. Phylogenetic study of the Treponema taxa found in digital dermatitis lesions of Holstein cows.
Project description:These are the additional files that were not already in public repositories for this manuscript. These samples are negative ionization mode, organic matter metabolomics datasets from many distinct environments, including global cropland; dryland; late Pleistocene-aged permafrost; temperate and tropical forest soils; rivers and lakes; and ocean DOM.
Project description:This dataset compared mycorrhizal-associated alterations in the plant primary metabolome across multiple plant-mycorrhizal fungus combinations. Specifically, we inoculated a phylogenetically diverse set of temperate tree species with either arbuscular mycorrhizal or ectomycorrhizal fungi (the two major mycorrhizal lifestyles). We then assessed the primary metabolome in mycorrhizal and non-mycorrhizal roots and the corresponding leaves.
Project description:We examined 36 biopsies taken from digital dermatitis lesions of Holstein cows. The target was the V3 -V4 variable region of 16S rRNA using Treponema specific primers. We identified 20 different taxa of Treponema using this approach.