Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Comparative Transcriptomics Analysis of Testicular miRNA from Hainan and Mongolian cattle

PROVIDER: PRJNA783200 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17026976.fastq.gz	Fastqsanger.gz
	SRR17026977.fastq.gz	Fastqsanger.gz
	SRR17026978.fastq.gz	Fastqsanger.gz
	SRR17026979.fastq.gz	Fastqsanger.gz
	SRR17026980.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

microRNA expression profile in renal tissues of rats with doxorubicin nephropathy by Mongolian medicine Narenmandula

Project description:Objective: Detection and analysis of Mongolian medicine Narenmandula the kernel full of adriamycin nephrosis rats kidney tissue expression of miRNA. Methods: The biological information of the differentially expressed miRNA between the normal group, the model group and the Mongolian medicine Narenmandula group was studied by Affymetrix miRNA chip detection. Results: The biological information of miRNA expression in kidney tissues of rats with doxorubicin nephropathy was analyzed by detection, which laid a foundation for further elucidating the multi-target regulatory role of Mongolian medicine Narenmandula in renal function protection and provided data. The biological information of miRNA expression in renal tissues of doxorubicin rats was detected and analyzed using Affymetrix miRNA chip detection technology, which laid a foundation for further elucidating the multi-target regulation effect of the renal function protection and provided data of Mongolian medicine Narenmandula .

2019-12-14 | GSE123776 | GEO

Comprehensive analysis of differentially expressed mRNA, circRNA and miRNA and their ceRNA networks in testis of cattle-yak, yak and cattle

Project description:Cattle-yak is the hybrid offspring of yak and cattle. It has obvious heterosis in production performance, but the male sterility of cattle-yak has always been the focus of attention. Studies have shown that non-coding RNA is involved in the regulation of spermatogenesis. We comprehensively compared the testicular transcription profiles of cattle, yak and cattle-yak. More DEGs, DECs and DEMs were found in the intersection of the two comparison groups of cattle and cattle-yak, yak and cattle-yak, with 4,968, 360 and 59, respectively. The DEGs of cattle-yak, cattle and yak were mainly enriched in biological processes such as spermatogenesis, male gamete generation and sexual reproduction. At the same time, GO and KEGG analysis suggested that DECs host genes and DEMs source genes were also involved in the regulation of spermatogenesis. The construction of potential ceRNA networks found that some differentially expressed ncRNAs may be involved in the regulation of genes related to testicular spermatogenesis, including miR-423-5p, miR-449b, miR-34b/c, miR-15b, etc., as well as unreported miR-6123, miR-1306 and some miRNA and circRNA interaction pairs. This study provides a reference for further study on the mechanism of male sterility in cattle-yak.

2024-02-06 | GSE254886 | GEO

Testicular transcriptome in crossbred and Zebu cattle

Project description:To understand the etiology behind higher incidence of infertility in crossbred bulls, we performed transcriptomic analysis of testicular samples derived from crossbred males and compared with testicular transcriptomic profile of Zebu cattle

2020-07-08 | GSE153952 | GEO

Project description:Mongolian cattle genome

| PRJNA1140538 | ENA

Genomics-based molecular epidemiology of human clinical and feedlot cattle C. jejuni isolates in Alberta, Canada

Project description:Oligonucleotide DNA microarrays were used as a platform to compare C. jejuni isolates from feedlot cattle and human clinical cases from Alberta. Comparative genomic hybridization (CGH) analysis was performed on 87 isolates (46 bovine, 41 human) obtained within the same geographical regions and time frame. In addition, We also performed gene association analysis to determine if any genes may be differentially distributed between human and cattle sources or between clusters dominated by either human or cattle isolates (“human enriched” vs “cattle enriched”). Keywords: Comparative Genomic Hybridization; Genomic epidemiology; Gene-association study

2008-10-17 | GSE13228 | GEO

Project description:Mongolian cattle genome sequencing

| PRJNA598339 | ENA

Single-cell Analysis of Adipose Tissues Revealed the Potential Cellular and Molecular Mechanism of Cold and Disease Resistance in Mongolian Cattle

Project description:Adipose tissue plays essential roles in adapting to harsh environmental conditions in Mongolian cattle. To dig out the cellular and molecular mechanism of adipose tissue taking part in the tolerance of rough feeding, cold temperature and disease of Mongolian cattle, here, we applied single-nucleus RNA-seq to map the landscape of cell types and profiles of transcriptome of adipose tissues at different anatomical depots at single-nucleus resolution. The entire adipogenic trajectory from preadipocyte commitment to mature adipocytes was analyzed. The results showed that the existence of different adipocyte subpopulations at subcutaneous, perirenal and greater omentum for which acting as a storage depot for body energy to protect vital organs and to insulate the body against heat loss.The interaction between macrophages and adipocytes and as an endocrine and immunologically active organ to regulate systemic energy and metabolism homeostasis and to modulate T cell activity and subsequent adipose tissue inflammation through antigen presentation of adipocytes to T cells.The data provide a powerful resource for future hypothesis-driven investigations of the mechanisms of adipocyte differentiation and adipose tissue plasticity.

2024-06-02 | GSE264101 | GEO

Project description:Sequencing genomes of Mongolian cattle

| PRJNA844484 | ENA

Bos indicus

Project description:Whole genome sequencing of Hainan cattle

| PRJNA1057059 | ENA

Equus caballus

Project description:Transcriptome Analysis of piRNAs during testicular development and spermatogenesis of Mongolian horse

| PRJNA393269 | ENA