Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Metagenomes of sewage sludge from Iran

ABSTRACT: Raw sequence reads of metagenomes of sewage sludge from Iran

PROVIDER: PRJNA787411 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17408621_1.fastq.gz	Fastqsanger.gz
	SRR17408621_2.fastq.gz	Fastqsanger.gz
	SRR17408622_1.fastq.gz	Fastqsanger.gz
	SRR17408622_2.fastq.gz	Fastqsanger.gz
	SRR17408623_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 26

Similar Datasets

Sewage Sludge samples from March-June 2020

Project description:.RAW files and Compound Discoverer peak lists used for a manuscript regarding changes the chemical fingerprint of sewage sludge during the COVID-19 pandemic

2021-01-08 | MSV000086676 | MassIVE

Sewage sludge

Project description:Sewage sludge Raw sequence reads

| PRJNA991294 | ENA

Sewage sludge

Project description:Sewage sludge Raw sequence reads

| PRJNA856455 | ENA

sewage sludge biodrying

Project description:sewage sludge biodrying Raw sequence reads

| PRJNA1149512 | ENA

wasted sewage sludge

Project description:wasted sewage sludge Raw sequence reads

| PRJNA1133680 | ENA

GNPS Sewage Sludge samples from March-June 2020

Project description:.RAW files and Compound Discoverer peak lists used for a manuscript regarding changes the chemical fingerprint of sewage sludge during the COVID-19 pandemic

2021-01-08 | MSV000086676 | GNPS

Shotgun metaproteomic profiling of biomimetic anaerobic digestion processes treating sewage sludge

Project description:Two parallel anaerobic digestion lines were designed to match a "bovid-like" digestive structure. Each of the lines consisted of two Continuous Stirred Tank Reactors placed in series and separated by an acidic treatment step. The first line was inoculated with industrial inocula whereas the second was seeded with cow digestive tract contents. After three month of continuous sewage sludge feeding, samples were recovered for shotgun metaproteomic and DNA-based analysis. Strikingly, protein inferred and 16S rDNA tags based taxonomic community profiles were not fully consistent. Principal Component analysis however revealed a similar clustering pattern of the samples, suggesting that reproducible methodological and/or biological factors underlie this observation. The performances of the two digestion lines did not differ significantly and the cow derived inocula did not establish in the reactors. A low throughput metagenomic dataset (3.4x106 reads, 1.1 Gb) was also generated for one of the samples. It allowed a substantial increase of the analysis depth (increase of the spectral identification rate). For the first time, a high level of proteins expressed by members of the "Candidatus Competibacter" group is reported in an anaerobic digester, a key microbial player in environmental bioprocess communities.

2015-08-12 | PXD002420 | Pride

Sewage sludge composting material

Project description:Sewage sludge composting material Raw sequence reads

| PRJNA851182 | ENA

Different conditioned sewage sludge

Project description:Different conditioned sewage sludge Raw sequence reads

| PRJNA486582 | ENA

Anaerobically digested sewage sludge

Project description:Anaerobically digested sewage sludge raw sequence reads

| PRJNA962313 | ENA