Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: ITS2 rDNA nemabiome metabarcoding of gastrointestinal nematodes in Australian livestock utilising the FECPAKG2 platform

PROVIDER: PRJNA790679 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17274300_1.fastq.gz	Fastqsanger.gz
	SRR17274300_2.fastq.gz	Fastqsanger.gz
	SRR17274301_1.fastq.gz	Fastqsanger.gz
	SRR17274301_2.fastq.gz	Fastqsanger.gz
	SRR17274302_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 200

Similar Datasets

Project description:ITS2 rDNA and isotype-1 beta-tubulin nemabiome metabarcoding to investigate gastrointestinal nematode diversity and benzimidazole resistance in sympatric sheep, cattle and feral goats

| PRJNA936713 | ENA

Project description:ITS2 rDNA nemabiome of two isolated populations of wild roe deer (Capreolus capreolus)

| PRJNA765944 | ENA

Project description:18S rDNA metabarcoding of soil nematodes in a Solidago-invaded meadow

| PRJNA1162454 | ENA

Project description:ITS-2 rDNA and beta-tubulin isoform 1 gene amplicon metabarcoding "nemabiome" from faeces of Cambodian dogs

| PRJNA1014795 | ENA

Project description:ITS2 metabarcoding of plant communities

| PRJNA713322 | ENA

Nematodirus battus

Project description:A gastrointestinal nematode parasite of livestock

| PRJNA20453 | ENA

Nematodirus battus

Project description:A gastrointestinal nematode parasite of livestock

| PRJNA20455 | ENA

RNA-seq of bovine peripheral blood mononuclear cells stimulated with an innate immune stimulant containing cell wall fractions of Mycobacterium phlei compared with untreated cells

Project description:Innate immune stimulants may contribute to reducing reliance on antimicrobials in human and livestock health management. The stimulant used in the experiment had not previously been investigated for its impact at the transcriptomic level in cattle, hence the experiment was designed to explore this impact. Peripheral blood mononuclear cells were isolated from bovine whole blood, cultured in media and stimulated with various doses of the stimulant (0, 2, 5, 12.5 or 31.25ug per million cells). Total RNA were extracted at 0, 6 and 24 hours following stimulation. Samples were sequenced by the Australian Genome Research Facility using Illlumina Sequencing in two lanes on two different dates. Samples 1-12 were sequenced first, samples 13-36 were sequenced subsequently.

2024-03-31 | E-MTAB-13418 | biostudies-arrayexpress

Project description:DNA markers for metabarcoding of soil nematodes

| PRJEB27581 | ENA

ITS2 metabarcoding of plants

Project description:ITS2 metabarcoding of plants Raw sequence reads

| PRJNA704945 | ENA