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Lotus japonicus

ABSTRACT: Lotus japonicus Raw sequence reads

PROVIDER: PRJNA791779 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	SRR17335100_1.fastq.gz	Fastqsanger.gz
	SRR17335100_2.fastq.gz	Fastqsanger.gz
	SRR17335095_1.fastq.gz	Fastqsanger.gz
	SRR17335095_2.fastq.gz	Fastqsanger.gz
	SRR17335096_1.fastq.gz	Fastqsanger.gz

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Constitutive over-expression of LjMyb14 in Lotus japonicus.

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Project description:Lotus japonicus is a model legume broadly used to study transcriptome regulation under different stress conditions and microorganism interaction. Understanding how this model plant respond gainst alkaline stress will certainly help to develop more tolerant cultivars in economically important Lotus species as well as in other legumes. In order to uncover the most important response mechanisms activated during alkaline stress, we explored by microarray analysis the transcriptome regulation occurring in the phenotypically contrasting ecotypes MG-20 and Gifu B-129 of L. japonicus after 21 days of alkaline stress.

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Project description:Lotus japonicus is a model legume broadly used to study transcriptome regulation under different stress conditions and microorganism interaction. Understanding how this model plant protects itself against pathogens will certainly help to develop more tolerant cultivars in economically important Lotus species as well as in other legumes. In order to uncover the most important defense mechanisms activated upon bacterial attack, we explored by microarray analysis the transcriptome regulation occurring in the phenotypically contrasting ecotypes MG-20 and Gifu B-129 of L. japonicus after inoculation with the non-pathogenic strain Pseudomonas syringae DC3000 pv. tomato.

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Project description:RNA-seq analysis was performed to know the expression profiles of Lotus japonicus genes during nodule development and nitrogen fixation.

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