Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: microbial on ancient ivory

PROVIDER: PRJNA792744 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17346370.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Project description:microbial on ancient ivory

| PRJNA752777 | ENA

Project description:Fungal communities on ancient ivory tusks

| PRJNA956838 | ENA

Project description:Bacterial Communities on ancient ivory tusks

| PRJNA957050 | ENA

Species identification of ivory and bone museum objects using minimally invasive proteomics

Project description:Ivory is a highly prized material in many cultures since it can be carved into intricated designs and have a highly polished surface. Due to its popularity, the animals from which ivory can be sourced have started to come under threat. Identification of the ivory species is not only important for compliance with the Convention on International Trade in Endangered Species of Wild Fauna and Flora (CITES), it can also provide important information about the context in which the work was created. In this work, we have developed a minimally invasive workflow to remove minimal amounts of material from precious objects, and, using high-resolution mass spectrometry-based proteomics, identified the taxonomy of several ivory and bone objects from the collection of The Metropolitan Museum of Art dating from as early as 4000 B.C. We built an inhouse proteomic databases of underrepresented species based on exemplars obtained from the Mammology American Museum of Natural History collection and proposed alternative data analysis workflows for rare samples containing sparse and inconsistently preserved organic material. This is a first application demonstrating extensive and accurate ivory species identification using proteomics to unlock sequence uncertainties, e.g. Leu/Ile-discrimination.

2024-02-05 | PXD042536 | Pride

Tracing the medieval walrus ivory trade

Project description:Ancient DNA reveals the chronology of walrus ivory trade from Norse Greenland

| PRJEB25536 | ENA

Metaproteomic analyses of microbial community from ancient permafrost

Project description:It remains challenging to study the viability and metabolic activity of microorganisms buried in ancient permafrost. We coupled aspartic acid racemization assay with metaproteomics to constraint the microbial activity of indigenous microbial community entrappped in permafrost sediment over 100 kyr ago.

2021-09-09 | PXD022683 | Pride

Tiassale (deltamethrin exposed) compared to N'Gousso

Project description:Resistant Tiassale (Ivory Coast) strain compared to the lab susceptible N'Gousso. Tiassale was exposed to deltamethrin and the survivors were left for 48 hours prior to the array being performed.

2015-02-07 | E-MTAB-3210 | biostudies-arrayexpress

M'Be (deltamethrin exposed) compared to N'Gousso

Project description:Resistant M'Be (Ivory Coast) strain compared to the lab susceptible N'Gousso. M'Be was exposed to deltamethrin and the survivors were left for 48 hours prior to the array being performed.

2015-02-07 | E-MTAB-3211 | biostudies-arrayexpress

Bouake (deltamethrin exposed) compared to N'Gousso

Project description:Resistant Bouake (Ivory Coast) strain compared to the lab susceptible N'Gousso. Bouake was exposed to deltamethrin and the survivors were left for 48 hours prior to the array being performed.

2015-02-07 | E-MTAB-3212 | biostudies-arrayexpress

RNAseq of old and young Macrotermes bellicosus (Blattodea, Isoptera) individuals

Project description:Examination of aging in social insects. Differential gene expression between old and young individuals of four castes of the termite Macrotermes bellicosus. Minor workers, major workers, kings, queens. Collected in January 2015 in Ivory Coast.

2018-04-26 | E-MTAB-6767 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data