Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ChIP_Seq analysis in cultured mTSC cells with or without Dox

ABSTRACT: ChIP_Seq analysis in cultured mTSC cells with or without Dox

PROVIDER: PRJNA803922 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17901518_1.fastq.gz	Fastqsanger.gz
	SRR17901518_2.fastq.gz	Fastqsanger.gz
	SRR17901519_1.fastq.gz	Fastqsanger.gz
	SRR17901519_2.fastq.gz	Fastqsanger.gz
	SRR17901520_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

ChIP_Seq analysis in cultured mTSC cells with or without Dox

Project description:To detect the direct target genes of H4K20me1, H4K20me3, and H3K4me3 in mTSCs, mTSCs with or without Dox are collected and subjected to ChIP-Seq. After aligned to mouse mm10 by HISAT2, peaks are called by MACS2. Our results show that methylation of H4K20 mediated by Pr-set7 as the key regulator of mTSCs, indicating the essential role of Pr-set7. This ChIP-Seq data provides fundamental information for our further physiological study of Pr-set7.

2023-06-28 | GSE196222 | GEO

ChIP_Seq analysis in cultured hTSCs

Project description:ChIP_Seq analysis in cultured hTSCs

| PRJNA803923 | ENA

ChIP_seq

Project description:ChIP_seq

| PRJEB4895 | ENA

Expression data from ALDH− and ALDH+ shXIst0SUM159 cells treated with or without DOX

Project description:We used microarrays to identify differentially expressed miRNAs in ALDH− and ALDH+ cells treated with or without DOX

2023-08-02 | GSE222742 | GEO

Targeted ErbB3 loss in mammary organoids harvested from ErbB3 DOX-KO mice +/- DOX treatment

Project description:Mammary organoids harvested from ErbB3 DOX-KO mice, which utilize MMTV-Cre transgene expression in the LE to cause genomic recombination at floxed ErbB3 alleles in ErbB3FL/FL were cultured in the presence or absence of doxycycline to induce ErbB3 loss. The gene expression shift following DOX-induced ErbB3 loss in the 3D organoids was examined by microarray.

2012-01-04 | GSE32129 | GEO

Gene expression analysis of Jurkat cells cultured with or without BCAA

Project description:Gene expression analysis of Jurkat cells cultured with or without BCAA

| PRJNA545056 | ENA

Gene expression analysis of Kasumi9 cells cultured with or without BCAA

Project description:Gene expression analysis of Kasumi9 cells cultured with or without BCAA

| PRJNA545055 | ENA

Expression data from ALDH− and ALDH+ shXIst0SUM159 cells treated with or without DOX

Project description:Expression data from ALDH− and ALDH+ shXIst0SUM159 cells treated with or without DOX

| PRJNA923290 | ENA

H3K27ac HiChIP analysis in GI-MEN DOX-ASCL1 cells

Project description:H3K27ac HiChIP analysis was performed in GI-MEN DOX-ASCL1 cells to analyze active chromatin-chromatin interactions in GI-MEN DOX-ASCL1 cells.

2023-11-21 | GSE214792 | GEO

RNA-seq analysis of transcriptome changes upon Erk knockout, or Mek inhibition in WT and Erk KO ESCs.

Project description:RNA-seq were performed with six samples, WT KH2 ESCs treated with or without PD0325901 for 48 hours (KH2_PD and KH2, respectively), iErk1; Erk KO ESCs cultured in the presence Dox (P0), 48 and 96 hours after Dox withdrawal (P1 and P2, respectively), and iErk1; Erk KO ESCs cultured without Dox for 96 hours, and treated with PD0325901 in the last 48 hours (P2_PD). iErk1; Erk KO ESCs cultured without Dox does not express Erk, thus mimicking Erk KO.

2015-09-29 | GSE70304 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data