Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Wound memory of epidermal stem cells [scRNAseq_L5]

ABSTRACT: Wound memory of epidermal stem cells [scRNAseq_L5]

PROVIDER: PRJNA811145 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18166300.fastq.gz	Fastqsanger.gz
	SRR18166400.fastq.gz	Fastqsanger.gz
	SRR18166500.fastq.gz	Fastqsanger.gz
	SRR18166600.fastq.gz	Fastqsanger.gz
	SRR18166700.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 637

Similar Datasets

Wound memory of epidermal stem cells

Project description:Wound memory of epidermal stem cells

| PRJNA811143 | ENA

Wound memory of epidermal stem cells [scRNAseq_L1]

Project description:Wound memory of epidermal stem cells [scRNAseq_L1]

| PRJNA811336 | ENA

Wound memory of epidermal stem cells [bulk RNA-seq]

Project description:Wound memory of epidermal stem cells [bulk RNA-seq]

| PRJNA811337 | ENA

Wound memory of epidermal stem cells [scRNAseq L1 PRT]

Project description:Wound memory of epidermal stem cells [scRNAseq L1 PRT]

| PRJNA811147 | ENA

Wound memory of epidermal stem cells [scRNAseq L1-aged]

Project description:Wound memory of epidermal stem cells [scRNAseq L1-aged]

| PRJNA811146 | ENA

Wound memory of epidermal stem cells [scRNAseq_L1]

Project description:Trained wound-memory in epidermal cells elicits a more efficient response to future injuries, but the full spectrum of their adaptive responses and the contribution of cell lineage subsets is unknown. We performed single cell RNA-Seq of Lrig1 and Lgr5 stem cell progenies in the context of two consecutive skin injuries to deeply characterise lineage specific adaptation mecanisms.

2023-02-02 | GSE197585 | GEO

Wound memory of epidermal stem cells [scRNAseq_L5]

2023-02-02 | GSE197589 | GEO

Wound memory of epidermal stem cells [bulk RNA-seq]

Project description:Trained wound-memory in epidermal cells elicits a more efficient response to future injuries, but the full spectrum of their adaptive responses and the contribution of cell lineage subsets is unknown. We performed mini bulk RNA-Seq of Lrig1 and Lgr5 stem cell progenies in the context of two consecutive skin injuries to deeply characterise lineage specific adaptation mecanisms.

2023-02-02 | GSE197583 | GEO

Wound memory of epidermal stem cells [scRNAseq L1-aged]

Project description:Wound priming in epidermal Lrig1 stem cell progeny leads to a more efficient response to future injuries. To understand if primed progenitors maintain during aging the transcriptional program acquired during wound healing in young age, we performed single cell RNA-Seq of Lrig1 stem cell progeny 40 weeks after injury.

2023-02-02 | GSE197588 | GEO

Wound memory of epidermal stem cells [scRNAseq L1 PRT]

Project description:Wound priming in epidermal Lrig1 stem cell progeny leads to a more efficient response to future injuries. To identify a key epigenetic factor of this cellular adaptation, we performed an epigenetic drug screening in Lrig1 genetically labled mice. Pre-treatment with PRT4165 lead to a more efficient wound closure. To understand if PRT4165 was able to recapitulate wound priming, we performed single cell RNA-seq transcriptome profiling of epidermal Lrig1 stem cell progenies from PRT4165-treated or untreated murine skin. [PRT4165is an inhibitor of the enzymatic activity of Ring1a/Ring1b, component of the Polycomb repressive complexes 1 (PRC1), responsible for the monoubiquitination of lysin 119 on histone H2A (H2AK119ub)]

2023-02-02 | GSE197586 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data