Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Heterosigma akashiwo

ABSTRACT: Heterosigma akashiwo overview

PROVIDER: PRJNA81413 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	DRR198893_1.fastq.gz	Fastqsanger.gz
	DRR198893_2.fastq.gz	Fastqsanger.gz
	DRR198894_1.fastq.gz	Fastqsanger.gz
	DRR198894_2.fastq.gz	Fastqsanger.gz
	DRR198895_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 116

Similar Datasets

Heterosigma akashiwo strain:H93616

Project description:Heterosigma akashiwo transcriptome

| PRJDB15108 | ENA

Heterosigma akashiwo RNA virus

Project description:Heterosigma akashiwo RNA virus

| PRJNA17024 | ENA

Ocean warming and acidification affect the transitional C:N:P ratio and macromolecular accumulation in the harmful raphidophyte Heterosigma akashiwo

Project description:We used single cell RNA-seq to comprehensively map raphidophyte Heterosigma akashiwo to grow under present and future ocean conditions. We unveiled several unique types of metabolic changes, signaling pathways, and regulons associated with these cells.

2023-01-20 | GSE223198 | GEO

Heterosigma akashiwo

Project description:Transcriptome analysis of infection process of Heterosigma akashiwo virus strain 53

| PRJDB6241 | ENA

Heterosigma akashiwo strain:CCMA369

Project description:Heterosigma akashiwo strain:CCMA369 Raw sequence reads

| PRJNA700717 | ENA

Heterosigma akashiwo

Project description:De novo transcriptome assembly and analysis of the fish-killling raphidophyte Heterosigma akashiwo using the Illumina sequencing

| PRJNA1072663 | ENA

Diversity in Infection Specificity between the Bloom-forming Microalga Heterosigma akashiwo and Its dsDNA Virus, Heterosigma akashiwo Virus.

Project description:Heterosigma akashiwo virus (HaV) is a dsDNA virus that infects the bloom-forming raphidoflagellate Heterosigma akashiwo. Both the host and its virus are phenotypically diverse in terms of infection specificity. Their relationships have been examined based on the occurrence or absence of algal lysis following virus inoculation; however, variations in the strain-level host-virus relationship regarding infectivity and lysis rates remain unclear. Therefore, we performed a series of cross-infectivity tests using 60 H. akashiwo and 22 HaV strains isolated from the coastal waters of western Japan. The host strains were divided into 5 different groups and viruses into 4 groups. Using a representative strain from each group, algal lysis was observed in 14 of the (5×4=) 20 host-virus combinations; the concentration of infectious units in each HaV suspension was then assessed using the most probable number (MPN) assay on the five host strains. Virus titers ranged between 1.1×101 and 2.1×107 infectious units mL-1; the titer of each viral lysate was differently estimated using distinct H. akashiwo strains as hosts. These results suggest that (1) a clonal viral lysate comprises virions with different intraspecific infection specificities and/or (2) the efficiency and error rates of each intracellular replication process vary in each host-virus combination.

| S-EPMC10308240 | biostudies-literature

Complete Genome Sequence of a Phycodnavirus, Heterosigma akashiwo Virus Strain 53.

Project description:We report the complete genome sequence of Heterosigma akashiwo virus strain 53. The virus is a member of the Phycodnaviridae, one of the families regarded as giant double-stranded DNA viruses. The 274,793-bp genome contained 246 protein-coding and 3 tRNA-coding sequences.

| S-EPMC5105112 | biostudies-literature

Ocean warming and acidification affect the transitional C:N:P ratio and macromolecular accumulation in the harmful raphidophyte Heterosigma akashiwo

Project description:Ocean warming and acidification affect the transitional C:N:P ratio and macromolecular accumulation in the harmful raphidophyte Heterosigma akashiwo

| PRJNA925205 | ENA

Akashiwo sanguinea

Project description:The fungal community living with the laboratory-cultured Akashiwo sanguinea

| PRJNA892755 | ENA