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RNA sequencing of LINC00958 silenced and LINC00958 non-silenced Ishikawa cells

ABSTRACT: RNA sequencing of LINC00958 silenced and LINC00958 non-silenced Ishikawa cells

PROVIDER: PRJNA816160 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR18326921.fastq.gz	Fastqsanger.gz
	SRR18326922.fastq.gz	Fastqsanger.gz
	SRR18326923.fastq.gz	Fastqsanger.gz
	SRR18326924.fastq.gz	Fastqsanger.gz
	SRR18326925.fastq.gz	Fastqsanger.gz

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RNA sequencing of LINC00958 silenced and LINC00958 non-silenced Ishikawa cells

Project description:To confirm the downstream genes of LINC00958, we employed RNA sequencing (RNA-seq) to identify the differentially expressed genes when LINC00958 was silenced in Ishikawa cells. The sample of LINC00958-silenced Ishikawa cells (sh-LINC00958, n=3) and negative control cells (sh-NC, n=2) were sent to Shanghai Sangon Biotech of China for library construction, sequencing, data preprocessing and gene mapping. Sequencing was performed on an DNBSEQ-T7 platform for the generation of raw data. Genes were considered significantly differentially expressed if the P value < 0.05 and |log2FC| > 1.The results showed that a total of 305 mRNAs were regulated after LINC00958 knockdown (fold change>2, P<0.05)

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