Project description:We isolated an efficient tetracycline degrading strain Sphingobacterium sp. WM1. To investigate gene expression patterns during tetracycline degradation by strain WM1, we conducted a comparative transcriptomic analysis using cultures of strain WM1 with and without tetracycline addition. The RNA-Seq data revealed that 90.44-96.56% of the reads mapped to the genome of Sphingobacterium sp. WM1 across all samples. Differentially expressed genes (DEGs) analysis (|log2FC| >2; p < 0.01) showed that 693 genes were significantly up-regulated and 592 genes were significantly down-regulated.

2023-09-21 | GSE234909 | GEO

Sphingobacterium lumbrici strain:1.3611

Project description:Sphingobacterium lumbrici strain:1.3611 Genome sequencing and assembly

| PRJNA528867 | ENA

Sphingobacterium pedocola strain:Ka21

Project description:Sphingobacterium pedocola strain:Ka21 Genome sequencing and assembly

| PRJNA433290 | ENA

Sphingobacterium litopenaei strain:DN04309

Project description:Sphingobacterium litopenaei strain:DN04309 Genome sequencing and assembly

| PRJNA657675 | ENA

Sphingobacterium alkalisoli strain:Y3L14

Project description:Sphingobacterium alkalisoli strain:Y3L14 Genome sequencing and assembly

| PRJNA533943 | ENA

Sphingobacterium prati strain:arapr2

Project description:Sphingobacterium prati strain:arapr2 Genome sequencing and assembly

| PRJNA633341 | ENA

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