Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Bacterial communities in root-associated compartments of broomcorn millet are affected by crop growth and mulching practice

PROVIDER: PRJNA825130 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18697023_1.fastq.gz	Fastqsanger.gz
	SRR18697023_2.fastq.gz	Fastqsanger.gz
	SRR18697024_1.fastq.gz	Fastqsanger.gz
	SRR18697024_2.fastq.gz	Fastqsanger.gz
	SRR18697025_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 108

Similar Datasets

Comparison of the root tip transcriptome of 2 pearl millet lines with contrasted primary root growth

Project description:We analysed global gene expression in the primary root tip of 2 pearl millet (Pennisetum glaucum) inbred lines with high (line 249) and low (line 337) primary root growth using RNAseq. The objective was to identify genes potentially associated with changes in root growth.

2021-10-10 | GSE185517 | GEO

Panicum miliaceum subsp. miliaceum

Project description:Resequencing of broomcorn millet

| PRJNA916977 | ENA

Project description:Genotypes/compartments affected bacterial communities

| PRJNA574806 | ENA

Grasses suppress shoot-borne roots to conserve water during drought

Project description:Setaria viridis, the wild ancestor of millet, exhibits strong repression of crown root growth in drought. We compare in gene expression in the S. viridis crown between drought vs watered treatments.

2016-07-22 | GSE78054 | GEO

Proteomic analysis of Pennisetum glaucum under drought stress

Project description:Pearl millet [Pennisetum glaucum (L.) R.Br] is the fifth most important cereal crop next to rice, wheat, maize, and sorghum. It is cultivated especially by small holder farmers in arid and semi-arid regions because of its drought resistance. However, the molecular mechanisms during drought stress in Pennisetum remain elusive. In the present study we have used a shotgun proteomics approach (GEL-LC-Orbitrap-MS) for identification and quantification of proteins from different tissues (root, seed and leaf) under drought and control conditions. Plants were grown in a tube system to survey root growth under drought stress. The water content was measured in the upper and the lower part of the tube using soil moisture sensors. Under drought stress root elongation was observed. Measurement of stomatal conductance showed a clear response to drought stress. For proteomics measurements root, leaf and seed tissues were harvested. In total 2281 proteins were identified, 1095 in root, 1299 in seed, and 1208 in leaf in both stress and control conditions.

2023-08-23 | PXD002923 | Pride

Project description:RNA-seq of broomcorn millet

| PRJNA1077764 | ENA

Project description:Transcriptome analysis of broomcorn millet smut

| PRJNA893337 | ENA

Project description:BAC pool sequencing of broomcorn millet

| PRJNA576359 | ENA

Project description:Genotypes/compartments affected bacterial communities in acid soil

| PRJNA613772 | ENA

Project description:Transcriptome response to drought in broomcorn millet

| PRJNA751482 | ENA