Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq of AFP-positive and negative liver tissues in LiKM mice

ABSTRACT: RNA-seq of AFP-positive and negative liver tissues in LiKM mice

PROVIDER: PRJNA832277 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18925645_1.fastq.gz	Fastqsanger.gz
	SRR18925645_2.fastq.gz	Fastqsanger.gz
	SRR18925646_1.fastq.gz	Fastqsanger.gz
	SRR18925646_2.fastq.gz	Fastqsanger.gz
	SRR18925647_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

RNA-seq of AFP-positive and negative liver tissues in LiKM mice

Project description:RNA-seq of AFP-positive and negative liver tissues in LiKM (KrasG12D mutation and Mdm2 loss in the liver) mice. This study was aimed to clarify gene expression profile of AFP-positive cells in LiKM mice to clarify their characteristics.

2022-08-24 | GSE201593 | GEO

Differential proteomics between AFP-negative HCC and adjacent non-tumor liver tissue

Project description:We screened and identified novel proteins in AFP-negative HCC tissue that were differentially expressed related to levels in adjacent non-tumor liver tissue using SWATH-MS proteome technology

2021-11-02 | PXD028854 | Pride

microRNA data in human EGFR positive versus EGFR negative colorectal cancer tissues

Project description:microRNA data in human EGFR positive versus EGFR negative colorectal cancer tissues

| PRJNA473846 | ENA

Transcriptional characterization of PD-1 positive and negative Foxp3 negative CD4 positive T cells from liver of 5- and 10-day-old Aire-deficient C57BL/6 mice

Project description:Transcriptional characterization of PD-1 positive and negative Foxp3 negative CD4 positive T cells from liver of 5- and 10-day-old Aire-deficient C57BL/6 mice

| PRJNA525690 | ENA

Expression profiling of Notch constitutive activation in the liver of mice

Project description:Notch intracellular domain (NICD) is the active form of the Notch receptor. In this mouse model, NICD is inserted in the Rosa26 locus downstream of a loxP-STOP-LoxP (lsl) sequence and therefore NICD expression is dependant on Cre recombinase expression (Mono transgenic control Rosa26-lsl-NICD) . These mice are crossed with the AFP-Cre strain that expresses Cre in hepatoblasts due to its regulation by the AFP promoter and albumin enhancer (Double transgenic mutant AFP-Cre/Rosa26-lsl-NICD). Newborn mice at day 0 and day 2 are sacrificed and liver RNA samples from control monotransgenic Rosa26-lsl-NICD and from bitransgenic AFP-Cre/Rosa26-lsl-NICD (AFP-NICD) are obtained. Whole genome expression profiling of these samples is submitted. Five liver samples from Control mice and six liver samples from Mutant mice are analyzed using the Agilent Whole Mouse Genome Oligo Microarray G4122A platform. Array data was preprocessed and analyzed using GenePattern software and R.

2012-12-01 | E-GEOD-33560 | biostudies-arrayexpress

Expression analysis of AR-positive, ER-/PR-negative breast cancer and normal tissues

Project description:This study is intended to investigate the differences in biological molecular expression upon HER2 status (HER2-positive and –negative) in AR-positive, ER-/PR-negative breast cancer. Results indicate that differentially expressed genes were involved in olfactory transduction, major histocompatibility complex, ECM-receptor interaction, focal adhesion, adherens junction, as well as protein processing in endoplasmic reticulum.

2019-06-30 | GSE92252 | GEO

Expression profiling of Notch constitutive activation in the liver of mice

2012-12-01 | GSE33560 | GEO

Hippocampal cells multiplex positive and negative engrams

Project description:Hippocampal cells multiplex positive and negative engrams

| PRJNA816561 | ENA

Transcriptome of Chat positive and negative ILC2s

Project description:Transcriptome of Chat positive and negative ILC2s

| PRJNA691600 | ENA

Hippocampal cells multiplex positive and negative engrams

Project description:Hippocampal cells multiplex positive and negative engrams

| PRJNA858461 | ENA