Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Fusarium falciforme strain:C5

ABSTRACT: First draft genome sequence resource of a strain of Fusarium falciforme isolated in Sinaloa, Mexico

PROVIDER: PRJNA843444 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR19440938_1.fastq.gz	Fastqsanger.gz
	SRR19440938_2.fastq.gz	Fastqsanger.gz
	SRR19440939_1.fastq.gz	Fastqsanger.gz
	SRR19440939_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Fusarium falciforme

Project description:Fusarium falciforme overview

| PRJNA843818 | ENA

Fusarium falciforme

Project description:Fusarium falciforme Genome sequencing and assembly

| PRJNA389708 | ENA

Fusarium falciforme

Project description:Fusarium falciforme Genome sequencing and assembly

| PRJNA843338 | ENA

Fusarium falciforme strain:UASB | isolate:UASB

Project description:Fusarium falciforme strain:UASB | isolate:UASB Genome sequencing and assembly

| PRJNA1164427 | ENA

Discovery and Differential Expression of miRNAs in Fusarium Wilt Resistant and Susceptible Banana Varieties

Project description:MicroRNAs (miRNAs) are a class of endogenous non-coding small RNAs that regulate targeted mRNAs by degrading or repressing translation, considered as post-transcrption regulators. So far, a large number of miRNAs have been discovered in model plants, but little information is available on miRNAs in banana. In this study, by sequencing the small RNA (sRNA) transcriptomes of Fusarium wilt resistant and susceptible banana varieties, 139 members in 38 miRNA families were discovered, and six out of eight new miRNAs were confirmed by RT-PCR. According to the analysis of sRNA transcriptome data and qRT-PCR verification, some miRNAs were differentially expressed between Fusarium wilt resistant and susceptible banana varieties. Two hundred and ninety-nine and 31 target genes were predicted based on the draft maps of banana B genome and Fusarium oxysporum (FOC1, FOC4) genomes respectively. Specifically, two important pathogenic genes in Fusarium oxysporum genomes, feruloyl esterase gene and proline iminopeptidase gene, were targeted by banana miRNAs. These novel findings may provide a new strategy for the prevention and control of Fusarium wilt in banana.

2016-10-14 | GSE74005 | GEO

Fusarium falciforme vertebral abscess and osteomyelitis: case report and molecular classification.

Project description:Fusarium is a ubiquitous mold that can cause superficial infections such as keratitis and onychomycosis in immunocompetent humans; however, infections in immunocompromised hosts can be fatal. We report an unusual case of epidural abscess and vertebral osteomyelitis in a patient with an autoimmune disorder who was on long-term glucocorticoids. Multilocus DNA sequence-based typing revealed that the infection was caused by a novel three-locus haplotype of Fusarium falciforme designated FSSC 3+4qqq.

| S-EPMC3122754 | biostudies-literature

Fusarium avenaceum strain:F156N33

Project description:Draft genome of Fusarium avenaceum

| PRJNA720629 | ENA

Fusarium xylarioides strain:KSU18978

Project description:Draft genome of Fusarium xylarioides

| PRJNA530275 | ENA

Fusarium bataticola FSSC 23

Project description:Fusarium bataticola FSSC 23 Standard Draft

| PRJNA334373 | ENA

Fusarium cucurbiticola FSSC 10

Project description:Fusarium cucurbiticola FSSC 10 Standard Draft