Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Microbial Assemblage on Cladophora Mats

PROVIDER: PRJNA843787 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR19508754_1.fastq.gz	Fastqsanger.gz
	SRR19508754_2.fastq.gz	Fastqsanger.gz
	SRR19508755_1.fastq.gz	Fastqsanger.gz
	SRR19508755_2.fastq.gz	Fastqsanger.gz
	SRR19508756_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

Xenomicrobiota transplant experiment

Project description:Gut microbes elicit specific changes in gene expression in the colon of mice. We colonized germ-free mice with microbial communities from the guts of humans, zebrafish and termites, human skin and tongue, soil and estuarine microbial mats. We used microarrays to detail the differences in global gene expression in colon tissue that are caused by the different microbial communities 28 days after gavage into the germfree animal. Three biological replicates per group, male C57BL/6 mice (12-16 weeks old)

2014-10-02 | E-GEOD-57589 | biostudies-arrayexpress

Xenomicrobiota transplant experiment

2014-10-02 | GSE57589 | GEO

Metatranscriptomes of phytoplankton blooms from an ocean acidification mesocosm experiment

Project description:Sequencing the metatranscriptome can provide information about the response of organisms to varying environmental conditions. We present a methodology for obtaining random whole-community mRNA from a complex microbial assemblage using Pyrosequencing. The metatranscriptome had, with minimum contamination by ribosomal RNA, significant coverage of abundant transcripts, and included significantly more potentially novel proteins than in the metagenome. Keywords: metatranscriptome, mesocosm, ocean acidification

2008-02-08 | GSE10119 | GEO

bacteria

Project description:Cladophora

| PRJNA887762 | ENA

algae metagenome

Project description:Cladophora

| PRJNA326542 | ENA

algal metagenome

Project description:Shotgun metagenomic sequencing of the epiphytic communities in Cladophora mats from Lake Michigan

| PRJNA526911 | ENA

Middle Island Sinkhole microbial mat protein stable isotope fingerprinting

Project description:Metaproteomics data for a protein-stable isotope fingerprinting (P-SIF) study of phototrophic, sulfur-cycling benthic microbial mats in Middle Island Sinkhole, Lake Huron, USA

2022-10-27 | MSV000090594 | MassIVE

Metabolic traits of size-fractionated microbial communities at an oceanic deep chlorophyll maximum waters revealed via metaproteomics

Project description:we applied metaproteomic approach to capture proteins from three size-fractionated microbial communities at the DCM in the basin of the South China Sea. The deep recovery of proteomes from a marine DCM plankton assemblage provides the highest resolution of metabolic activities as well as microbial niche differentiation, revealing a spectrum of biological processes carrying out by microbes at DCM of the SCS.

2020-12-21 | PXD016812 | Pride

Middle Island Sinkhole Microbial Mat - Seasonality

Project description:Samples from benthic phototrophic microbial mats of Middle Island Sinkhole, Lake Huron, MI, USA. Peptides labeled in vitro for quantitative analysis by diDO-IPTL (Waldbauer et al. 2017 Anal. Chem.).

2022-01-20 | MSV000088706 | MassIVE

Project description:Thermophilic microbial mats

| PRJNA752523 | ENA