Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Anoxybacillus gonensis strain:NCIMB 13933

ABSTRACT: Anoxybacillus gonensis strain:NCIMB 13933 Genome sequencing and assembly

PROVIDER: PRJNA843951 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Anoxybacillus gonensis

Project description:Anoxybacillus gonensis overview

| PRJNA291113 | ENA

Anoxybacillus gonensis strain:G2

Project description:Anoxybacillus gonensis strain:G2 Genome sequencing and assembly

| PRJNA264351 | ENA

Anoxybacillus gonensis strain:G2

Project description:Anoxybacillus gonensis complete genome sequencing and assembly

| PRJNA290998 | ENA

Anoxybacillus gonensis strain:DSM 22626

Project description:Anoxybacillus gonensis strain:DSM 22626 Genome sequencing and assembly

| PRJNA860768 | ENA

Anoxybacillus gonensis strain:DT3-1

Project description:Anoxybacillus gonensis strain:DT3-1 Genome sequencing and assembly

| PRJNA182115 | ENA

Anoxybacillus kestanbolensis strain:NCIMB 13971

Project description:Anoxybacillus kestanbolensis strain:NCIMB 13971 Genome sequencing and assembly

| PRJNA827005 | ENA

Calcium effect to the Clostridium beijerinckii NCIMB 8052 degenerate strain for the solvent producing recovery

Project description:Solventogenic Clostridium species ferment carbohydrates to acetone, butanol and ethanol which are well-known next-generation biofuels. However, repeated subculture of or continuous fermentation by Clostridium often decreases and eventually terminates the solvent production and spore formation, which is a process called strain degeneration. Supplementation of CaCO3 to fermentation medium could partially recover metabolism of degenerated strain by more than 50% increase of cell growth and solvent production. The transcriptome profile of Clostridium beijerinckii NCIMB 8052 (DG-8052) and its response to CaCO3 treatment were analysed by microarray. Since fermentation by C. beijerinckii NCIMB 8052 is a biphasic process, gene expressions of two fermentations were compared at each stage, i.e. 12h and 24h fermentation time representing acidogenic phase and solventogenic phase, respectively. This study examined expression of 5168 genes capturing 98.6% of the C. beijerinckii NCIMB 8052 genome. With the addition of CaCO3, DG-8052 had 565 and 916 genes significantly up-regulated at acidogenic phase and solventogenic phase, respectively. According to the enrichment analysis of pathway and Gene Ontology terms and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway, these genes were significantly overrepresented in cellular functions such as Amino acid transport and metabolism, organic acid biosynthetic process, bacteria chemotaxis and defense mechanisms. On the other hand, there were 704 and 1044 genes significantly down-regulated at acidogenic phase and solventogenic phase, respectively. These repressed genes were mainly enriched in functions such as ion transmembrane transport, ATP synthesis, oxidative phosphorylation.

2017-01-02 | GSE81808 | GEO

Transcriptomic response of Anoxybacillus sp. SK 3-4 to aluminum exposure

Project description:By comparing the gene expression profiling in Anoxybacillus sp. SK 3-4 with and without aluminum exposure, the sets of gene up-regulated and down-regulated by aluminum were identified. The function of genes or proteins induced under these conditions can a reflection of the mechanism of resistance. Transcriptome profiling of Anoxybacillus sp. SK 3-4 treated by aluminum would allow a better understanding of the gene involving in tolerance and removal of aluminum.

2016-08-05 | GSE78908 | GEO

Secretome Analysis of Anoxybacillus caldiproteolyticus 1A02591

Project description:When Anoxybacillus caldiproteolyticus 1A02591 was cultured with casein, 12 proteases were identified in the secretome, in which metalloproteases (6/12), and serine proteases (4/12) accounted for the majority and a thermolysin-like protease of the M4 family was the most abundant, suggesting that strain 1A02591 mainly secreted a thermophilic metalloprotease.

2021-01-26 | PXD023396 | Pride

Transcriptomic response of Anoxybacillus sp. SK 3-4 to aluminum exposure

2016-08-05 | E-GEOD-78908 | biostudies-arrayexpress