Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genome sequencing of Burkholderia stabilis mutant strains

PROVIDER: PRJNA846080 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR19549058_1.fastq.gz	Fastqsanger.gz
	SRR19549058_2.fastq.gz	Fastqsanger.gz
	SRR19549059_1.fastq.gz	Fastqsanger.gz
	SRR19549059_2.fastq.gz	Fastqsanger.gz
	SRR19549060_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 42

Similar Datasets

Burkholderia stabilis

Project description:Burkholderia stabilis Genome sequencing

| PRJNA1098475 | ENA

Burkholderia stabilis

Project description:Burkholderia stabilis overview

| PRJNA344357 | ENA

Burkholderia stabilis strain:EB159

Project description:Burkholderia stabilis strain:EB159 Genome sequencing and assembly

| PRJNA487963 | ENA

Burkholderia stabilis strain:FERMP-21014

Project description:Burkholderia stabilis strain:FERMP-21014

| PRJDB5640 | ENA

Burkholderia stabilis strain:LA20W

Project description:Draft genome sequence of Burkholderia stabilis LA20W

| PRJDB4654 | ENA

Burkholderia stabilis strain:ATCC BAA-67

Project description:Burkholderia stabilis ATCC BAA-67 genome sequencing and assembly

| PRJNA328254 | ENA

diCenzo2020 - Sinorhizobium meliloti 1021 genome-scale metabolic model

Project description:An updated representation of S. meliloti metabolism that was manually-curated and encompasses information from 240 literature sources, which includes transposon-sequencing (Tn-seq) data and Phenotype MicroArray data for wild-type and mutant strains.

2020-06-01 | MODEL2003240001 | BioModels

Transcriptome analyses of toxoflavin-dependent genes in Fusarium graminearum wild-type GZ03639 and toxoflavin-sensitive mutants

Project description:Bacterial pathogen Burkholderia glumae and fungal pathogen Fusarium graminearum cause similar disease symptoms and often co-isolated from rice heads, inferring interactions between the two pathogens. F. graminearum is resistant to the bacterial toxin toxoflavin, a strong anti-microbial activity, produced by B. glumae. We isolated toxoflavin-sensitive mutants from transcription factor deletion mutant library of F. graminearum. To understand genome-wide transcriptional profiling, we performed RNA-seq analyses of F. graminearum wild-type strain GZ03639 and toxoflavin-sensitive mutant strains (∆GzZC190, ∆GzC2H008, ∆GzbZIP005) under toxoflavin condition.

2018-02-16 | GSE104623 | GEO

Strains of increasing genetic divergence to the reference strain

Project description:comparative genomic hybridization between Burkholderia cepacia sequenced strains to determine what are the limits to strain relativity in order to still provide accurate estimations of gene content

2010-02-06 | GSE20096 | GEO

Direct comparison between a Burkholderia cenocepacia glycosylation mutant, and a CRISPRi-mediated glycosylation knockdown strain

Project description:To determine whether CRISPR interference can be used to recapitulate a glycosylation null mutant strain in Burkholderia cenocepacia via data independent acquisition mass spectrometry using a low level of dCas9 induction. A guideless plasmid was containing in the wildtype and pglL mutant strains, and the strains harbouring the dCas9 insertion containing a pglL-targeting plasmid Bc-pglL-C, non-target, and the guideless plasmid.

2023-03-20 | PXD038043 | Pride

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data