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ABSTRACT: Characterization of the gut microbiota of yellow catfish (Pelteobagrus fulvidraco) infected with Edwardsiella ictaluri

PROVIDER: PRJNA847360 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR19623431_1.fastq.gz	Fastqsanger.gz
	SRR19623431_2.fastq.gz	Fastqsanger.gz
	SRR19623432_1.fastq.gz	Fastqsanger.gz
	SRR19623432_2.fastq.gz	Fastqsanger.gz
	SRR19623433_1.fastq.gz	Fastqsanger.gz

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Project description:In this study, we used next-generation sequencing technologies and tandem mass tags to characterize mRNA-seq, miRNA-seq and proteomic of Pelteobagrus fulvidraco, P. vachelli and hybrid yellow catfish Huangyou-1 (P. fulvidraco female×P. vachelli male) livers and in doing so, offer deeper insight into the transcriptional and protein changes in heterosis uncovers key roles for miRNAs.

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Project description:Edwardsiella ictaluri is the causitive agent of enteric septicemia of catfish, one of the most important diseases impacting US catfish industry. The overall objective of this study is to identify E. ictaluri genes required for serum resistance. 4-plex array study using total RNA obtained from wild type and mutant Edwardsiella ictaluri exposed to heat-inactivated catfish serum and normal serum. Each treatment had four biological replica and each plex had two probe sets.

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