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ABSTRACT: study of microbial diversity in rice and barnyardgrass root under co-culture condition

PROVIDER: PRJNA848992 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR19646500_1.fastq.gz	Fastqsanger.gz
	SRR19646500_2.fastq.gz	Fastqsanger.gz
	SRR19646501_1.fastq.gz	Fastqsanger.gz
	SRR19646501_2.fastq.gz	Fastqsanger.gz
	SRR19646502_1.fastq.gz	Fastqsanger.gz

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Transcriptome profile of wild type Azoarcus sp. BH72 grown under microaerobic condition (0.3% oxygen) compared with that grown under aerobic condition (21% oxygen), both in presence of combined nitrogen source, respectively

Project description:Low oxygen tensions are often encountered in flooded soils of rice fields by root-associated, strictly respiratory, beta proteobacterium, Azoarcus sp. BH72 which fixes nitrogen only under microaerobic condition. In this study, genome wide oligonucleotide microarrays were used compare the global transcription profile of Azoarcus sp. BH72 under microaerobic condition with cells grown under aerobic condition, both with ammonia as sole nitrogen source. The outcome of this study will provide a better insight about the establishment of this endophyte in the microaerobic environment, probably prevailing inside of the rice root niche .

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The transcriptomic landscapes of rice cultivars with diverse root system architectures grown in upland field conditions [DAP-seq]

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