Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Penicillium rubens strain:YAP1

ABSTRACT: Fungal isolate, Penicillium, derived from the symbiotic anemone, Exaiptasia diaphana CC7

PROVIDER: PRJNA867012 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR20972898_1.fastq.gz	Fastqsanger.gz
	SRR20972898_2.fastq.gz	Fastqsanger.gz
	SRR20972899_1.fastq.gz	Fastqsanger.gz
	SRR23558400_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 52

Similar Datasets

Project description:Microbiome of the sea anemone Exaiptasia diaphana (CC7 clonal line)

| PRJNA951783 | ENA

Exaiptasia diaphana

Project description:Exaiptasia diaphana overview

| PRJNA320330 | ENA

Exaiptasia diaphana

Project description:Exaiptasia diaphana overview

| PRJNA640207 | ENA

The proteome of dinoflagellate symbionts (Breviolum minutum) during symbiosis establishment in a model cnidarian

Project description:Cellular mechanisms responsible for the regulation of nutrient exchange, immune responses, and symbiont population growth in the cnidarian-dinoﬂagellate symbiosis are poorly resolved, particularly with respect to the dinoflagellate symbiont. Here, we characterised proteomic changes in the native symbiont Breviolum minutum during colonisation of its host sea anemone Exaiptasia diaphana (‘Aiptasia’). We also compared the proteome of this native symbiont in the established symbiotic state with that of a non-native symbiont, Durusdinium trenchii. The onset of symbiosis between Aiptasia and B. minutum induced increased accumulation of symbiont proteins associated with acquisition of inorganic carbon and photosynthesis, nitrogen metabolism, micro- and macronutrient starvation, suppression of the host immune responses, tolerance to low pH, and management of oxidative stress. Such responses are consistent with a functional, persistent symbiosis. In contrast, D. trenchii predominantly showed elevated levels of immunosuppressive proteins, consistent with the view that this symbiont is an opportunist that forms a less beneficial, less well-integrated symbiosis with this model anemone. By adding this analyses of the symbiont proteins to the already known responses of the host proteome, our results provide a more holistic view of cellular processes that determine host-symbiont specificity and how differences in symbiont partners, native versus non-native symbionts, may impact the fitness of the cnidarian-dinoflagellate symbiosis in response to thermal stress. This PRIDE entry contains the Breviolum minutum data; Durusdinium trenchii data are uploaded in a separate entry with identical parameters.

2024-01-18 | PXD045585 | Pride

The proteome of dinoflagellate symbionts (Durusdinium trenchii) during symbiosis establishment in a model cnidarian

Project description:Cellular mechanisms responsible for the regulation of nutrient exchange, immune responses, and symbiont population growth in the cnidarian-dinoﬂagellate symbiosis are poorly resolved, particularly with respect to the dinoflagellate symbiont. Here, we characterised proteomic changes in the native symbiont Breviolum minutum during colonisation of its host sea anemone Exaiptasia diaphana (‘Aiptasia’). We also compared the proteome of this native symbiont in the established symbiotic state with that of a non-native symbiont, Durusdinium trenchii. The onset of symbiosis between Aiptasia and B. minutum induced increased accumulation of symbiont proteins associated with acquisition of inorganic carbon and photosynthesis, nitrogen metabolism, micro- and macronutrient starvation, suppression of the host immune responses, tolerance to low pH, and management of oxidative stress. Such responses are consistent with a functional, persistent symbiosis. In contrast, D. trenchii predominantly showed elevated levels of immunosuppressive proteins, consistent with the view that this symbiont is an opportunist that forms a less beneficial, less well-integrated symbiosis with this model anemone. By adding this analyses of the symbiont proteins to the already known responses of the host proteome, our results provide a more holistic view of cellular processes that determine host-symbiont specificity and how differences in symbiont partners, native versus non-native symbionts, may impact the fitness of the cnidarian-dinoflagellate symbiosis in response to thermal stress. This PRIDE entry contains the Durusdinium trenchii data; Breviolum minutum data are uploaded in a separate entry with identical parameters.

2024-01-18 | PXD045587 | Pride

Penicillium rubens Wisconsin 54-1255

Project description:Penicillium chrysogenum Wisconsin 54-1255 Improved genome sequencing

| PRJNA246109 | ENA

Transcriptome characterization of Penicillium expansum induced by Meyerozyma guilliermondii

Project description:Antagonistic yeasts inhibit the growth of fungal. In our previous research, Meyerozyma guilliermondii one of antagonistic yeasts exhibits antagonistic activity against Penicillium expansum. However, the mechanisms, especially the molecular mechanisms of inhibiting activity of M. guilliermondii are not clear. In this study, the transcriptome characterization of P. expansum induced by M. guilliermondii were investigated.

2019-02-28 | GSE127259 | GEO

Project description:De novo transcriptome assembly of the gonads of a sea anemone, Exaiptasia diaphana.

| PRJNA1004228 | ENA

Exaiptasia diaphana

Project description:Reduced microbiome of Exaiptasia diaphana

| PRJNA576556 | ENA

Exaiptasia diaphana

Project description:Exaiptasia diaphana Raw sequence reads

| PRJNA518019 | ENA