Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Streptococcus agalactiae strain:BAU/MH/Bag-2014

ABSTRACT: Streptococcus agalactiae strain:BAU/MH/Bag-2014 Genome sequencing and assembly

PROVIDER: PRJNA879961 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR21811823_1.fastq.gz	Fastqsanger.gz
	SRR21811823_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Streptococcus agalactiae strain:BAU/MH/Bag-2010

Project description:Streptococcus agalactiae strain:BAU/MH/Bag-2010 Genome sequencing and assembly

| PRJNA879949 | ENA

Streptococcus agalactiae strain:BAU/MH/Bag-2013

Project description:Streptococcus agalactiae strain:BAU/MH/Bag-2013 Genome sequencing and assembly

| PRJNA879959 | ENA

Streptococcus uberis strain:BAU/MH/Bag-2002

Project description:Streptococcus uberis strain BAU/MH/Bag-2002 Genome sequencing and assembly

| PRJNA856652 | ENA

Streptococcus uberis strain:BAU/MH/Bag-2021

Project description:Streptococcus uberis strain BAU/MH/Bag-2021 Genome sequencing and assembly

| PRJNA856654 | ENA

Streptococcus uberis strain:BAU/MH/Bag-2053

Project description:Streptococcus uberis strain BAU/MH/Bag-2053 Genome sequencing and assembly

| PRJNA856664 | ENA

Streptococcus uberis strain:BAU/MH/Bag-2055

Project description:Streptococcus uberis strain:BAU/MH/Bag-2055 Genome sequencing and assembly

| PRJNA856665 | ENA

Streptococcus uberis strain:BAU/MH/Bag-2062

Project description:Streptococcus uberis strain:BAU/MH/Bag-2062 Genome sequencing and assembly

| PRJNA856669 | ENA

Infectious bursal disease virus strain:very virulent | isolate:BAU-MH-IBDV-BR-3

Project description:Infectious bursal disease virus strain:very virulent | isolate:BAU-MH-IBDV-BR-3 Raw sequence reads

| PRJNA998029 | ENA

A BAG-1-inhibitory peptide, GO-Pep, suppresses c-Raf activity in cancer

Project description:Herein, we explore the druggability of BAG-1S (the smallest isoform) with a specific emphasis on its interaction with C-RAF. We firstly characterize the higher order structure of BAG-1S structure to determine druggable sites by HDX-MS. We then map the BAG-1S:c-Raf interface – identifying a 20 amino acid region likely to interact with c-Raf. Following which, we use mutational analysis of BAG-1S to show specific amino acids that disrupt the BAG-1S:c-Raf interaction, downstream signaling and cell growth. Finally, we develop a BAG-1S interacting peptide (from c-Raf) that disrupts BAG-1 protein:protein interactions (including C/B-RAF, CHIP and HSP70) and modified with a cell-penetrating motif which inhibits the growth of cancer cells with associated signaling inhibition and induction of apoptosis.

2024-12-17 | PXD058656 | Pride

Next Generation Sequencing of PD-iPSC derived midbrain dopaminergic(mDA) neurons treated with CDC (C021 dihychloride) or BAG (BAG 956)

Project description:Purpose: The goals of this study are to identify cellular pathways to recover a-syn aggregation-mediated toxicity induced in response to CDC or BAG treatment on PD-iPSC derived mDA neurons. Methods: mRNA profiles of 30-day-old PD-mDA neurons with CDC or BAG treatment for 1 day were generated by deep sequencing, in duplicate, using Illumina HiSeq. The sequence reads that passed quality filters were analyzed at the transcript isoform level with two methods: Burrows–Wheeler Aligner (BWA) followed by ANOVA (ANOVA) and TopHat followed by Cufflinks. Conclusions: Our study represents the detailed analysis of mDA neuronal transcriptomes in response to CDC or BAG treatments, with biologic replicates, generated by RNA-seq technology. Our results show that CDC or BAG treatment could rescue the toxcity from a-syn aggregation via purine metabolism / ion transport pathways.

2021-06-30 | GSE153325 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data