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Edwardsiella ictaluri

ABSTRACT: Edwardsiella ictaluri Genome sequencing

PROVIDER: PRJNA883509 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR21796723.fastq.gz	Fastqsanger.gz
	SRR21796723_1.fastq.gz	Fastqsanger.gz
	SRR21796723_2.fastq.gz	Fastqsanger.gz

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Expression analysis of channel catfish anterior kidney at 48h post immersion challenge of vaccinated fish (28 days post vaccination with attenuated Edwardsiella ictaluri) with virulent E. ictaluri

2011-10-05 | GSE32588 | GEO

Expression analysis of channel catfish anterior kidney at 48h post immersion vaccination with attenuated Edwardsiella ictaluri

Project description:To determine the global gene transcriptional changes in channel catfish anterior kidney after immersion vaccination with attenuated Edwardsiella ictaluri compared to sham vaccinated catfsih control. The attenuated Edwardsiella ictaluri used for vaccination was Aquavac-ESC which was commercially available.

2011-09-10 | GSE32046 | GEO

Edwardsiella ictaluri

Project description:Edwardsiella ictaluri Genome sequencing

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Project description:Edwardsiella ictaluri Genome sequencing

| PRJNA882567 | ENA

Expression analysis of Edwardsiella ictaluri 93-146 wild type and mutant strains during catfish serum exposure.

2013-12-15 | GSE46011 | GEO

Expression analysis of Edwardsiella ictaluri 93-146 wild type and mutant strains during catfish fry encounter.

2013-12-15 | GSE46007 | GEO

Expression analysis of Edwardsiella ictaluri 93-146 wild type and mutant strains during catfish fry encounter.

Project description:Edwardsiella ictaluri is the causitive agent of enteric septicemia of catfish, one of the most important diseases impacting US catfish industry. The overall objective of this study is to identify E. ictaluri genes required for host encounter. 4-plex NimbleGen array study using total RNA obtained from wild type and mutant Edwardsiella ictaluri encountered with or without catfish fry. Each treatment had four biological replica and each plex had two probe sets.

2013-12-15 | E-GEOD-46007 | biostudies-arrayexpress

Expression analysis of Edwardsiella ictaluri 93-146 wild type and mutant strains during catfish serum exposure.

Project description:Edwardsiella ictaluri is the causitive agent of enteric septicemia of catfish, one of the most important diseases impacting US catfish industry. The overall objective of this study is to identify E. ictaluri genes required for serum resistance. 4-plex array study using total RNA obtained from wild type and mutant Edwardsiella ictaluri exposed to heat-inactivated catfish serum and normal serum. Each treatment had four biological replica and each plex had two probe sets.

2013-12-15 | E-GEOD-46011 | biostudies-arrayexpress

Expression analysis of channel catfish anterior kidney at 48h post immersion challenge of vaccinated fish (28 days post vaccination with attenuated Edwardsiella ictaluri) with virulent E. ictaluri

Project description:To determine the global gene transcriptional changes in vaccinated channel catfish anterior kidney after immersion challenge with a virulent Edwardsiella ictaluri compared to sham vaccinated catfish control. The attenuated Edwardsiella ictaluri used for vaccination was Aquavac-ESC which was commercially available, the virulent strain of Edwardsiella ictaluri is the AL93-58 strain. A six chip study using total RNA samples including 3 controls (no vaccination, no challenge) and 3 treated groups (challenge after vaccination). Each RNA sample used for microarray was pooled fish anterior kidney samples (5 fish anterior kidney samples were pooled as one). Each chip measrues the expression level of 65,182 genes. For each sequence, 3 probes were selected. Two copies were prepared on arrays.

2011-10-04 | E-GEOD-32588 | biostudies-arrayexpress

Edwardsiella ictaluri

Project description:Draft genome sequence of Edwardsiella ictaluri

| PRJDB12966 | ENA