Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Dairy cattle rumen 16S rRNA

ABSTRACT: dairy cattle rumen 16S rRNA Genome sequencing

PROVIDER: PRJNA883555 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21681543_1.fastq.gz	Fastqsanger.gz
	SRR21681543_2.fastq.gz	Fastqsanger.gz
	SRR21681544_1.fastq.gz	Fastqsanger.gz
	SRR21681544_2.fastq.gz	Fastqsanger.gz
	SRR21681545_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 40

Similar Datasets

Expression analysis of rumen epithelium of cattle during weaning

Project description:Investigation of whole genome gene expression level changes in rumen epithelium of dairy cattle at different stages of rumen development and on different diets.

2009-11-01 | GSE18382 | GEO

Cattle rumen microbiota

Project description:16S rRNA sequence of rumen microbes in dairy cattle

| PRJEB28065 | ENA

dairy cattle rumen metagenome

Project description:dairy cattle rumen metagenome Raw sequence reads

| PRJNA909074 | ENA

dairy cattle rumen metagenome

Project description:dairy cattle rumen metagenome Raw sequence reads

| PRJNA907195 | ENA

RNA-Seq data of ruminal epithelial tissue and 16S rRNA sequencing data of rumen digesta in goats infusion of three short-chain fatty acids [16s rRNA-seq]

Project description:Emerging data has highlighted the importance of short-chain fatty acids (SCFAs), particularly butyrate, in regulating ruminal homeostasis in vivo isolated epithelial cells. However, little is known about other SCFAs like acetate or propionate, and the interaction between rumen microbes and epithelial immunity are rarely reported. Here, we firstly combined infusion of three SCFAs, to study their different roles in ruminal development, antioxidant capacity, barrier functions, and immunity, as well as cross-talk with ruminal microbiome (16S rRNA sequencing data of rumen digesta) and derived transcriptome (RNA-Seq) and metabolism using an in vivo goat model.

2022-12-26 | GSE221508 | GEO

Rumen microbiota 16S rRNA of cattle fed with PET

Project description:Rumen microbiota 16S rRNA of cattle Raw sequence reads

| PRJNA1178614 | ENA

dairy cattle feces 16S

Project description:dairy cattle feces 16S Raw sequence reads

| PRJNA933720 | ENA

Holstein-Friesian Dairy Cattle Rumen

Project description:Holstein-Friesian Dairy Cattle Rumen Raw sequence reads

| PRJNA554894 | ENA

Effect of Dietary Grain on Rumen Papillae Gene Expression in Holstein Dairy Cows

Project description:Four mature, non-lactating dairy cattle were transitioned from a high forage diet (HF; 0% grain) to a high grain diet (HG; 65% grain) that was fed for three weeks. Rumen papillae biopsies were performed during the HF baseline (week 0) and after the first (week 1) and third week (week 3) of the grain challenge to create a transcript profile for the the short and long-term adaption of the rumen epithelium during ruminal acidosis. Comparison between three weekly means (n=4 for each week, 12 arrays in total)

2009-08-28 | E-GEOD-17849 | biostudies-arrayexpress

Effect of Dietary Grain on Rumen Papillae Gene Expression in Holstein Dairy Cows

2009-08-28 | GSE17849 | GEO