Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Poecilia picta whole genome bisulfite sequencing data

PROVIDER: PRJNA884417 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21715800_1.fastq.gz	Fastqsanger.gz
	SRR21715800_2.fastq.gz	Fastqsanger.gz
	SRR21715801_1.fastq.gz	Fastqsanger.gz
	SRR21715801_2.fastq.gz	Fastqsanger.gz
	SRR21715802_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 34

Similar Datasets

Poecilia picta strain:suriname

Project description:Poecilia picta whole genome bisulfite sequencing (muscle, liver, gonad)

| PRJNA884372 | ENA

Poecilia picta

Project description:Poecilia picta overview

| PRJNA935020 | ENA

Poecilia picta isolate:Suriname

Project description:Poecilia picta Genome sequencing and assembly

| PRJNA862953 | ENA

A multicenter translational biomarker phase II trial of regorafenib in patients with non-resectable pretreated colorectal cancer.

Project description:Primary objectives: The primary objective is to investigate circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS). Primary endpoints: circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS).

| 2533916 | ecrin-mdr-crc

Project description:Poecilia picta Male somatic RNA sequence

| PRJNA885447 | ENA

Analyses of methylomes of multiple tissues in cattle

Project description:In this study, we generated whole genome bisulfite sequencing data of 19 samples for 13 tissues in Holstein cattle. We analyzed the variations of DNA methylation among tissues. In this study, we generated whole genome bisulfite sequencing data of 6 samples for 5 tissues in Hereford cattle. We analyzed the variations of DNA methylation among tissues.

2020-04-30 | GSE147087 | GEO

Project description:Whole genome bisulfite sequencing data

| PRJNA555706 | ENA

Bisulfite sequencing data of one human DNA sample

Project description:Bisulfite conversion and whole genome-single base next generation sequencing of DNA from a single iPSC clone (CMC28). This method provides exceptional depth of the sequenced methylome. Bisulfite converted DNA from a single iPSC clone (CMC28), and get its high-throughput sequence data with Illumina.

2011-02-12 | E-GEOD-27239 | biostudies-arrayexpress

methylSig: a whole genome DNA methylation analysis pipeline

Project description:DNA methylation plays critical roles in gene regulation and cellular specification without altering DNA sequences. The wide application of reduced representation bisulfite sequencing (RRBS) and whole genome bisulfite sequencing (bis-seq) opens the door to study DNA methylation at single CpG site resolution. One challenging question is how best to test for significant methylation differences between groups of biological samples in order to minimize false positive findings. Current methods to analyze genome-wide bisulfite sequencing data use a smoothing approach or a simple statistical test based on the binomial distribution. Comparative DNA methylation profiling in AML blasts and normal CD34(+) control cells

2014-08-22 | E-GEOD-55569 | biostudies-arrayexpress

Whole genome bisulfite Sequencing data of four types mouse spermatogenesis

Project description:We applied whole genome bisulfite Sequencing data and profiled genome-wide DNA methylation distribution in four germ cell types during spermatogenesis.

2020-07-17 | GSE137743 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data