Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [2022_RNA_2]

ABSTRACT: Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [2022_RNA_2]

PROVIDER: PRJNA888984 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21851100.fastq.gz	Fastqsanger.gz
	SRR21851101.fastq.gz	Fastqsanger.gz
	SRR21851102.fastq.gz	Fastqsanger.gz
	SRR21851103.fastq.gz	Fastqsanger.gz
	SRR21851104.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 14

Similar Datasets

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche

Project description:Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche

| PRJNA660810 | ENA

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [2022_RNA_1]

Project description:Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [2022_RNA_1]

| PRJNA888985 | ENA

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [bulk RNA]

Project description:Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [bulk RNA]

| PRJNA660813 | ENA

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [single-cell RNA-seq]

Project description:Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [single-cell RNA-seq]

| PRJNA660812 | ENA

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [2022_RNA_2]

Project description:In addition to adipocytes, adipose tissue (AT) is populated by mesenchymal stem cells (MSC) in stages of commitment to the adipocyte lineage, and immune cells which support homeostatic tissue function. How MSC and immune cells interact during infection is poorly understood. We found that during intestinal nematode infection, MSC in gut-associated AT (mFAT) exhibit a bias away from commitment to the adipocyte lineage towards a pluripotent progenitor state. During this time, MSC became metabolically active, and began secreting the alarmins IL-33 and TSLP, and extracellular matrix collagens. In parallel, mFAT became irreversibly populated by Th2 resident memory (Th2RM) cells, which make the tissue modulatory cytokines amphiregulin and TGFβ1. Secretion of these cytokines, and Th2RM activation and maintenance, was driven by IL-33 and TSLP and in turn MSC activation was induced by amphiregulin and TGFβ1. Our findings link Th2RM cells to reversible mFAT remodeling during intestinal infection and underscore the reciprocal dependence of stroma and resident immune cells for lasting tissue immunity.

2022-10-13 | GSE215137 | GEO

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [2022_RNA_1]

2022-10-13 | GSE215136 | GEO

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [bulk RNA]

2022-08-18 | GSE157312 | GEO

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche [single-cell RNA-seq]

2022-04-15 | GSE157313 | GEO

Intestinal type 2 inflammation reprograms mesenteric adipose tissue and permanently alters its resident immune cell niche

Project description:This SuperSeries is composed of the SubSeries listed below.

2022-08-18 | GSE157314 | GEO

Chronic inflammation permanently reshapes tissue-resident immunity in celiac disease

Project description:Chronic inflammation driven by persistent antigenic challenge with dietary gluten permanently reshapes the tissue-resident TCRgd+ intraepithelial lymphocyte compartment in patients with celiac disease.

2018-12-12 | GSE123649 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data