Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: RAD-Seq analysis of single amplified genomes of Gonyostomum semen

PROVIDER: PRJNA891215 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21929945_1.fastq.gz	Fastqsanger.gz
	SRR21929945_2.fastq.gz	Fastqsanger.gz
	SRR21929946_1.fastq.gz	Fastqsanger.gz
	SRR21929946_2.fastq.gz	Fastqsanger.gz
	SRR21929947_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 84

Similar Datasets

Project description:Marine single-cell amplified genomes

| PRJNA743799 | ENA

Winery Wastewater Single Amplified Genomes

Project description:Winery Wastewater Single Amplified Genomes

| PRJNA589250 | ENA

Epigenome analysis of DNA modification 5-hydroxymethylcytosine in normal, abnormal, and globozoospermia sperm genomes

Project description:Genome wide of 5-hydroxymethylcytosine profiling of normal and abnormal, and globozoospermia sperm genomes.Two semen samples were collected from a healthy man and a globozoospermia patient who had consulted a physician at ShengJing Hospital of China Medical University. Other semen samples obtained from two volunteers who were good health generally. 5-hmC enriched genomic DNA libraries were generated following the Illumina protocol for M-bM-^@M-^\Preparing Samples for CHIP sequencing of DNAM-bM-^@M-^]. 100bp single end sequencing on Illumina Hiseq2000 to get 5-hmC-enriched DNA fragment sequence was performed. Examination of 5hmC levels in normal, abnormal, and globozoospermia sperm genomes

2013-04-18 | E-GEOD-46135 | biostudies-arrayexpress

Single Amplified Mamiellales Genomes

Project description:Single Amplified Mamiellales Genomes Genome sequencing and assembly

| PRJNA549236 | ENA

Project description:RAD-seq of 1000 Carya genomes

| PRJNA614625 | ENA

protist metagenome

Project description:Marine protist metagenomes from low coverage single amplified genomes

| PRJNA655200 | ENA

Project description:Whole genome sequence of single amplified genomes of river bacteria

| PRJNA822037 | ENA

Project description:SAG-RAD analysis of Gonyostomum semen populations in Europe and in the United States

| PRJNA988296 | ENA

Viruses encode tRNA and anti-retron to evade bacterial immunity [Ec83]

Project description:Retrons are bacterial genetic retroelements that encode reverse transcriptase capable of producing multicopy single-stranded DNA (msDNA) and function as antiphage defense systems. Phages employ several strategies to counter the host defense systems, but no mechanisms for evading retrons are known. Here, we show that tRNATyr and Rad (retron anti defense) of T5 phage family inhibit the defense activity of retron 78 and a broad range of retrons, respectively. The effector protein of retron 78, ptuAB, specifically degraded tRNATyr leading abortive infection, but phage countervailed this defense by supplying tRNATyr. Rad inhibited retron function by degrading noncoding RNA, the precursor of msDNA. In summary, we demonstrated that viruses encode at least two independent strategies for overcoming bacterial defense systems: anti-defense, such as Rad, and defense canceler, like tRNA.

2024-10-10 | GSE256077 | GEO

Viruses encode tRNA and anti-retron to evade bacterial immunity [PrrC170]

2024-10-10 | GSE256078 | GEO