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Nylanderia fulva

ABSTRACT: Nylanderia fulva Raw sequence reads

PROVIDER: PRJNA892980 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	SRR22968500_1.fastq.gz	Fastqsanger.gz
	SRR22968500_2.fastq.gz	Fastqsanger.gz
	SRR22968501_1.fastq.gz	Fastqsanger.gz
	SRR22968501_2.fastq.gz	Fastqsanger.gz
	SRR22968502_1.fastq.gz	Fastqsanger.gz

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Isolation and characterization of Nylanderia fulva virus 1, a positive-sense, single-stranded RNA virus infecting the tawny crazy ant, Nylanderia fulva.

Project description:We report the discovery of Nylanderia fulva virus 1 (NfV-1), the first virus identified and characterized from the ant, Nylanderia fulva. The NfV-1 genome (GenBank accession KX024775) is 10,881 nucleotides in length, encoding one large open reading frame (ORF). Helicase, protease, RNA-dependent RNA polymerase, and jelly-roll capsid protein domains were recognized within the polyprotein. Phylogenetic analysis placed NfV-1 in an unclassified clade of viruses. Electron microscopic examination of negatively stained samples revealed particles with icosahedral symmetry with a diameter of 28.7±1.1nm. The virus was detected by RT-PCR in larval, pupal, worker and queen developmental stages. However, the replicative strand of NfV-1 was only detected in larvae. Vertical transmission did not appear to occur, but horizontal transmission was facile. The inter-colonial field prevalence of NfV-1 was 52±35% with some local infections reaching 100%. NfV-1 was not detected in limited samples of other Nylanderia species or closely related ant species.

| S-EPMC4980443 | biostudies-literature

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