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ABSTRACT: RNA-Seq of hypo- and hyper-salinity stress-response transcriptome in the brain of greater amberjack (Seriola dumerili) juveniles

PROVIDER: PRJNA893248 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR22014018_1.fastq.gz	Fastqsanger.gz
	SRR22014018_2.fastq.gz	Fastqsanger.gz
	SRR22014019_1.fastq.gz	Fastqsanger.gz
	SRR22014019_2.fastq.gz	Fastqsanger.gz
	SRR22014020_1.fastq.gz	Fastqsanger.gz

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Molecular Adaptation to Ambient Salinity Oscillations in Greater Amberjack (Seriola dumerili): Implications to Aquaculture

Project description:Ambient salinity is one of the crucial abiotic factors that poses substantial impacts on fish growth, development and reproduction. Greater amberjack (Seriola dumerili) is of high economic value because, and its reproduction and survival are sensitive to water salinity. To better understand the molecular adaptive mechanism to salinity fluctuations in greater amberjack, we performed comparative transcriptome analysis for gill and kidney between the optimum salinity (30 ppt, CK) and undesired regimes (10 and 40 ppt). For the gill, the skeletal development was provoked upon either hypo- or hyper-salinity stimuli, and the development of pronephros, as well as vascular endothelial cells and cortisol-mediated mitochondria-rich cell, was activated in response to the salinity alterations in kidney. These enhancements may encourage the maintenance of the gill and kidney structures and alleviate the salinity-induced damage. Ion channels NKCC1 and CFTR and the transporters for ammonium and other substances were highly upregulated in the gills and kidney, respectively, which act important roles in the osmoregulation of greater amberjack. More important, undesirable alterations of ambient salinity were found to pose adverse impacts on the immune function of greater amberjack, which may increase the risk of pathogen infection and reduce the security and yield of aquaculture of greater amberjack. In addition, deviation from the optimum salinity condition may result in undesirable uptake and accumulation of environmental toxins in greater amberjack, which attracts further attention to the food safety. Collectively, these novel findings advance our knowledge on adaptative mechanisms to ambient salinity oscillations in greater amberjack and provide a theoretical guidance for the optimal breeding mode for the aquaculture of greater amberjack.

2023-06-24 | GSE220485 | GEO

Project description:RNA-Seq of hypo- and hyper-salinity stress-response transcriptome in the liver of greater amberjack (Seriola dumerili) juveniles

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Project description:RNA-seq analysis reveals divergent adaptive response to hypo- and hyper-salinity in greater amberjack (Seriola dumerili) juveniles

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Project description:RNA-Seq analysis of acute salinity stress-responsive transcriptome in the liver of greater amberjack (Seriola dumerili) juveniles

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