Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Saxifraga fortunei var. pilosissima

ABSTRACT: Saxifraga fortueni var. pilosissima plastome sequencing and assembly

PROVIDER: PRJNA898074 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22225532.fastq.gz	Fastqsanger.gz
	SRR22225532_1.fastq.gz	Fastqsanger.gz
	SRR22225532_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 3 of 3

Similar Datasets

Saxifraga fortunei var. incisolobata

Project description:Development of microsatellite markers for Saxifraga fortunei

| PRJDB8004 | ENA

Saxifraga fortunei

Project description:Saxifraga fortunei overview

| PRJNA864950 | ENA

Saxifraga fortunei

Project description:phylogenetic studies on Saxifraga fortunei complex

| PRJDB10267 | ENA

Saxifraga sinomontana

Project description:Saxifraga sinomontana Assembly

| PRJNA999480 | ENA

Petrorhagia saxifraga

Project description:Petrorhagia saxifraga Genome sequencing and assembly

| PRJNA576112 | ENA

Saxifraga josephii

Project description:Saxifraga josephii Genome sequencing

| PRJNA1189460 | ENA

Development and characterization of EST-SSR markers for <i>Saxifraga fortunei</i> var. <i>incisolobata</i> (Saxifragaceae).

Project description:PremiseSaxifraga fortunei (Saxifragaceae) includes several infraspecific taxa that are ecologically and morphologically distinct. To investigate the evolutionary history of phenotypic polymorphisms in this species, we developed expressed sequence tag-simple sequence repeat (EST-SSR) markers for S. fortunei.Methods and resultsWe developed 26 polymorphic markers based on transcriptome data obtained from Illumina HiSeq 2000. Within three populations of S. fortunei var. incisolobata, the number of alleles ranged from four to 25, and the levels of observed and expected heterozygosity ranged from 0.200 to 0.847 and from 0.209 to 0.930, respectively. Furthermore, all 26 loci showed transferability for S. fortunei var. obtusocuneata and S. fortunei var. suwoensis, and 18 loci were also successfully amplified in S. acerifolia.ConclusionsThese newly developed EST-SSR markers will prove useful to infer the evolutionary history of S. fortunei var. incisolobata and its relatives in population genetic studies.

| S-EPMC6636618 | biostudies-literature

Saxifraga saxicola

Project description:Saxifraga saxicola

| PRJNA1196304 | ENA

Saxifraga luteoviridis

Project description:Saxifraga luteoviridis

| PRJNA1070291 | ENA

Saxifraga stolonifera

Project description:Saxifraga stolonifera overview

| PRJNA877322 | ENA