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Vibrio vulnificus MO6-24/O

ABSTRACT: Transcriptome duplicates of Vibrio vulnificus MO6-24/O wild type and carR mutant strains

PROVIDER: PRJNA905907 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR22438533_1.fastq.gz	Fastqsanger.gz
	SRR22438533_2.fastq.gz	Fastqsanger.gz
	SRR22438534_1.fastq.gz	Fastqsanger.gz
	SRR22438534_2.fastq.gz	Fastqsanger.gz
	SRR22438535_1.fastq.gz	Fastqsanger.gz

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Transcriptome analysis of Arabidopsis thaliana and Vibrio vulnificus MO6-24/O by RNA-seq

Project description:In order to analyze the transcripts of Arabidopsis thaliana (Col-0) and Vibrio vulnificus MO6-24/O simultaneously, Vibrio vulnificus MO6-24/O was infiltrated onto Arabidopsis leaves and then leaves were harvested at 0, 3, 6, 12, 24 and 48 h post-infiltration. A total of 31, 128, 303, 219 and 130 differentially expressed genes (DEGs) of Vibrio were up- and down-regulated at 3, 6, 12, 24 and 48 h post-infiltration (hpi). Meanwhile, differentially expressed genes (DEGs) were monitored at 3, 6, 12, 24 and 48 h post-infiltration. A total of 2,097, 1,839, 1,220, 1,170 and 1,383 genes were characterized at each time points in Arabidopsis. Our data clearly indicate that total transcripts of the marine bacterial pathogen V. vulnificus MO6-24/O are detected and analyzed in plant Arabidopsis and two organisms were inter-communicated at the same time under favorable conditions.

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