Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Acanthocheilonema viteae strain:FR3

ABSTRACT: Acanthocheilonema viteae strain:FR3 Raw sequence reads

PROVIDER: PRJNA906603 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR29493066_subreads.fastq.gz	Fastqsanger.gz
	SRR29493067_subreads.fastq.gz	Fastqsanger.gz
	SRR29493068_subreads.fastq.gz	Fastqsanger.gz
	SRR29493069_subreads.fastq.gz	Fastqsanger.gz
	SRR29493070_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Acanthocheilonema viteae

Project description:Acanthocheilonema viteae Raw sequence reads

| PRJNA284514 | ENA

Acanthocheilonema viteae

Project description:Acanthocheilonema viteae

| PRJNA33239 | ENA

Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae

Project description:The helminth Acanthocheilonema viteae serves as model organism for research on parasitic filarial nematodes. Total RNA secreted or excreted by 1500 adult female and male A. viteae over 3 weeks was isolated from culture media previously processed by differential ultracentrifugation, and subjected to miRNA sequencing.

2020-04-10 | GSE143793 | GEO

Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae

Project description:Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae

| PRJNA601727 | ENA

Cunninghamella echinulata strain:FR3

Project description:Cunninghamella echinulata strain:FR3 Raw sequence reads

| PRJNA454534 | ENA

Brugia malayi strain:FR3

Project description:Brugia malayi strain:FR3 Raw sequence reads

| PRJNA565193 | ENA

Brugia malayi isolate:FR3

Project description:Brugia malayi isolate:FR3 Raw sequence reads

| PRJNA294263 | ENA

Acanthocheilonema viteae

Project description:whole genome sequencing of the rodent filarial parasite

| PRJNA34849 | ENA

Acanthocheilonema_viteae_genome

Project description:genomic sequencing of Acanthocheilonema viteae

| PRJEB1697 | ENA

Secreted microRNA data from the parasitic filarial nematode Acanthocheilonema viteae.

Project description:microRNAs (miRNAs) are an abundant class of non-coding RNA species with important regulatory roles in gene expression at the posttranscriptional level. The helminth Acanthocheilonema viteae serves as model organism for research on parasitic filarial nematodes. Total RNA secreted or excreted in vitro by 1500 adult female and male A. viteae over 3 weeks was isolated from culture media previously processed by differential ultracentrifugation. miRNA sequencing revealed the presence of 360 unique miRNA candidates released by adult A. viteae in vitro. Among them, 74 high-confidence unique miRNAs, as well as several potential novel miRNA candidates were discovered. A large proportion of the sequenced miRNA candidates appeared differentially expressed between the male and female samples based on normalized copy count. The presence of extracellular vesicles, often rich in miRNAs, could not be confirmed unambiguously by transmission electron microscopy.

| S-EPMC7063170 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data