Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Effect of SASP factors on mouse intestinal organoids [bulk RNA-seq]

ABSTRACT: Effect of SASP factors on mouse intestinal organoids [bulk RNA-seq]

PROVIDER: PRJNA907130 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22475462.fastq.gz	Fastqsanger.gz
	SRR22475463.fastq.gz	Fastqsanger.gz
	SRR22475464.fastq.gz	Fastqsanger.gz
	SRR22475465.fastq.gz	Fastqsanger.gz
	SRR22475466.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Effect of SASP factors on mouse intestinal organoids

Project description:Effect of SASP factors on mouse intestinal organoids

| PRJNA907085 | ENA

Effect of SASP factors at single nucleus level of mouse intestinal organoids [snRNA-seq]

Project description:We report single nucleus RNAseq data from the mouse intestinal organoids cultured in quiescent or senescent conditioned media. Analysis revealed changes in cell composition and gene expression caused by SASP factors in senescent conditioned media.

2022-12-06 | GSE219127 | GEO

Effect of SASP factors on mouse intestinal organoids [bulk RNA-seq]

Project description:We report bulk RNAseq data from the mouse intestinal organoids cultured in different conditions. Differential gene expression analysis revealed a large overlap in induced genes between Wnt5a and SCM, consistent with a major contribution of non-canonical Wnt signaling to the SCM-induced cystic organoid phenotype. Of genes differentially regulated by Wnt5a and SCM, about half were Ptk7 dependent, which displayed strong enrichment for TEAD binding motifs.

2022-12-06 | GSE219126 | GEO

Effect of SASP factors at single nucleus level of mouse intestinal organoids [snRNA-seq]

Project description:Effect of SASP factors at single nucleus level of mouse intestinal organoids [snRNA-seq]

| PRJNA907129 | ENA

Bulk ATAC-seq of primate cerebral organoids

Project description:Bulk ATAC-seq was performed on human, chimpanzee, bonobo, and macaque stem cell-derived cerebral organoids. ATAC-seq was performed on day 60 (2 months old) and day 120 (4 months old) cerebral organoids.

2019-10-16 | E-MTAB-8228 | biostudies-arrayexpress

Effect of SASP factors on mouse intestinal organoids

Project description:This SuperSeries is composed of the SubSeries listed below.

2022-12-06 | GSE219128 | GEO

Bulk RNA sequencing of human intestinal and airway organoids

Project description:Bulk RNA sequencing was performed on intestinal and airway organoids. Also airway organoid derived air-liquid interface cultures were sequenced

2021-08-17 | GSE181514 | GEO

Bulk RNA sequencing of SARS-CoV and SARS-CoV-2 infected human intestinal organoids

Project description:Bulk RNA sequencing was performed on control and SARS-CoV and SARS-CoV-2 infected intestinal organoids.

2020-05-01 | GSE149312 | GEO

Post-slippage cells increase expression of factors associated with SASP.

Project description:Post-slippage cells increase expression of factors associated with SASP.

| PRJNA471655 | ENA

Regenerative landscape of intestinal organoids (bulk RNA-Seq 2)

Project description:Regenerative landscape of intestinal organoids (bulk RNA-Seq 2)

| PRJNA613090 | ENA