Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Food metagenome

ABSTRACT: Food metagenomes from retail meats in 2015.

PROVIDER: PRJNA909287 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22865500_1.fastq.gz	Fastqsanger.gz
	SRR22865500_2.fastq.gz	Fastqsanger.gz
	SRR22865501_1.fastq.gz	Fastqsanger.gz
	SRR22865501_2.fastq.gz	Fastqsanger.gz
	SRR22865502_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 64

Similar Datasets

food metagenome

Project description:African Fermented Food Metagenomes

| PRJNA1052643 | ENA

food metagenome

Project description:MetaGenomeTrakr project: food metagenomes (imported seafood)

| PRJNA540845 | ENA

Transcriptomic analysis of biofilm formation in persistent and transient Listeria monocytogenes from the retail deli environment

Project description:Persistence of Listeria monocytogenes in retail deli environments is a serious food safety issue, potentially leading to cross-contamination of ready-to-eat foods such as deli meats, salads, and cheeses. We previously discovered strong evidence of L. monocytogenes persistence in delis across multiple states. We hypothesized that this was correlated with isolates’ innate characteristics, such as biofilm-forming capacity or gene differences.We further chose four isolates for RNA-sequencing analysis and compared their global biofilm transcriptome to their global planktonic transcriptome. Analysis of biofilm vs planktonic gene expression did not show the expected differences in gene expression patterns. Overall, L. monocytogenes persistence in the deli environment is likely a matter of poor sanitation and/or facility design, rather than isolates’ biofilm-forming capacity, sanitizer tolerance, or genomic content

2021-06-11 | GSE176617 | GEO

Project description:Retail food long-read metagenomes

| PRJNA1107355 | ENA

food metagenome

Project description:Prevalence and Characterization of Antimicrobial Resistance in retail food in Mumbai, India

| PRJNA639905 | ENA

Food fermentation metagenomes

Project description:Food fermentation metagenomes Raw sequence reads

| PRJNA596883 | ENA

Food fermentation metagenomes

Project description:Food fermentation metagenomes Raw sequence reads

| PRJNA596904 | ENA