Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: High quality Haematococcus lacustris genome assembly and annotation reveals its diploid genetic features

PROVIDER: PRJNA910497 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22586866_1.fastq.gz	Fastqsanger.gz
	SRR22586866_2.fastq.gz	Fastqsanger.gz
	SRR22586867_1.fastq.gz	Fastqsanger.gz
	SRR22586867_2.fastq.gz	Fastqsanger.gz
	SRR22586868_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 25

Similar Datasets

Haematococcus lacustris

Project description:Haematococcus lacustris Assembly

| PRJNA562992 | ENA

Haematococcus lacustris

Project description:Haematococcus lacustris Genome sequencing

| PRJNA484813 | ENA

Agilent custom 24M array CGH data for the HuRef individual

Project description:The ideal genome sequence for medical interpretation is complete and diploid, capturing the full spectrum of genetic variation. Toward this end, there has been progress in discovery of single nucleotide polymorphism (SNP) and small (<10bp) insertion/deletions (indels), but annotation of larger structural variation (SV) including copy number variation (CNV) has been less comprehensive, even with available diploid sequence assemblies. We applied a multi-step sequence and microarray-based analysis to identify numerous previously unknown SVs within the first genome sequence reported from an individual. Agilent array CGH experiment was performed according to the manufacturer's directions on DNA extracted from lymphoblastoid cell lines. HuRef genomic DNA was co-hybridized with female sample NA15510 from the Polymorphism Discovery Resource. No replicate nor dye swap was done. The Agilent 24 million features CGH array set was designed with 23.5 million 60-mer oligonucleotide probes tiled along the NCBI Build 36 assembly.

2013-02-12 | E-GEOD-20288 | biostudies-arrayexpress

Haematococcus lacustris

Project description:Haematococcus lacustris Raw sequence reads

| PRJNA416246 | ENA

Haematococcus lacustris

Project description:Haematococcus lacustris Raw sequence reads

| PRJNA1145167 | ENA

Haematococcus lacustris

Project description:Haematococcus lacustris Raw sequence reads

| PRJNA1145171 | ENA

Haematococcus lacustris

Project description:Haematococcus lacustris Raw sequence reads