Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Effect of knockdown APE1 on gene expression in NCI-H460 cells

ABSTRACT: Effect of knockdown APE1 on gene expression in NCI-H460 cells

PROVIDER: PRJNA911583 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22704030_1.fastq.gz	Fastqsanger.gz
	SRR22704030_2.fastq.gz	Fastqsanger.gz
	SRR22704031_1.fastq.gz	Fastqsanger.gz
	SRR22704031_2.fastq.gz	Fastqsanger.gz
	SRR22704032_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Effect of knockdown APE1 on gene expression in NCI-H460 cells

Project description:To investigate the function APE1, we established NCI-H460 cell lines in which target gene has been knocked down by shRNA.We then performed gene expression profiling analysis using data obtained from RNA-seq of 2 different cells at the same time.

2024-01-01 | GSE220807 | GEO

NCI-H460-LNM35 vs NCI-H460-N15

Project description:Comparing genome-wide gene expression profiles of highly metastatic lung cancer cell line NCI-H460-LNM35 vs low metastatic parental clone NCI-H460-N15 Keywords: Expression profiling with cDNA microarray

2010-08-21 | GSE16649 | GEO

Knockdown CPT1 in NCI-H460 lung cancer cell line

Project description:CRISPRi-mediated transcriptional inhibition of CPT1 with two distinct sgRNAs in NCI-H460 lung cancer cells, to investigate the dynamics of gene expression regulation upon CPT1 knockdown.

2024-05-28 | GSE268180 | GEO

Knockdown CPT1 in NCI-H460 lung cancer cell line

Project description:Knockdown CPT1 in NCI-H460 lung cancer cell line

| PRJNA1115056 | ENA

Differential expression of genes after transfection of STAT6 specific siRNA in NCI-H460 cells

Project description:The experiment was designed to identify the genes which get altered after the transfection of siRNA targeting STAT6 in NCI-H460 cells. The NCI-H460 cells plated in 12-well plate were transfected with 60nM of STAT6 specific siRNA. Biological duplicates of 2 samples were used viz. control NCI-H460 cells (Contol), NCI-H460 cells transfected with siRNA (siRNA)

2011-12-01 | E-GEOD-25942 | biostudies-arrayexpress

Hi-C from NCI-H460 (ENCSR489OCU)

Project description:HiC experiment done on NCI-H460 For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2017-10-23 | GSE105725 | GEO

Differential expression of genes after transfection of STAT6 specific siRNA in NCI-H460 cells

2011-12-01 | GSE25942 | GEO

RAMPAGE from NCI-H460 (ENCSR093UPQ)

Project description:The libraries contained in this experiment come from independent growths of cell line NCI-H460, a male large cell lung carcinoma. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2016-11-08 | GSE88022 | GEO

RAMPAGE from NCI-H460 (ENCSR239ZQA)

Project description:The libraries contained in this experiment come from nuclear fractions of immortalized cell line NCI-H460 derived from a large cell lung carcinoma of a 37 year old male. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2016-11-08 | GSE88135 | GEO

RAMPAGE from NCI-H460 (ENCSR824YLV)

Project description:The libraries contained in this experiment come from cytoplasmic fractions of immortalized cell line NCI-H460 derived from a large cell lung carcinoma of a 37 year old male. They are stranded PE101 Illumina Hi-Seq RAMPAGE libraries from rRNA-depleted Total RNA > 200 nucleotides in size. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf

2016-11-08 | GSE88569 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data