Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Solanum lycopersicum cultivar:Ailsa Craig, adp, CL

ABSTRACT: Transcriptome analysis of tomato starch-deficient mutant (adp)

PROVIDER: PRJNA912612 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22751710.fastq.gz	Fastqsanger.gz
	SRR22751711.fastq.gz	Fastqsanger.gz
	SRR22751712.fastq.gz	Fastqsanger.gz
	SRR22751713.fastq.gz	Fastqsanger.gz
	SRR22751714.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 72

Similar Datasets

Metabolic differences in ripening of Solanum lycopersicum 'Ailsa Craig' and three monogenic mutants.

Project description:Application of mass spectrometry enables the detection of metabolic differences between groups of related organisms. Differences in the metabolic fingerprints of wild-type Solanum lycopersicum and three monogenic mutants, ripening inhibitor (rin), non-ripening (nor) and Colourless non-ripening (Cnr), of tomato are captured with regard to ripening behaviour. A high-resolution tandem mass spectrometry system coupled to liquid chromatography produced a time series of the ripening behaviour at discrete intervals with a focus on changes post-anthesis. Internal standards and quality controls were used to ensure system stability. The raw data of the samples and reference compounds including study protocols have been deposited in the open metabolomics database MetaboLights via the metadata annotation tool Isatab to enable efficient re-use of the datasets, such as in metabolomics cross-study comparisons or data fusion exercises.

| S-EPMC4322568 | biostudies-literature

Solanum lycopersicum cultivar:Ailsa Craig

Project description:Transcriptome analysis of tomato fruits exposed to heat stress

| PRJNA603594 | ENA

Solanum lycopersicum strain:Ailsa Craig-derived mutants

Project description:Transcriptome profiling of tomato fruits of allelic mutants in the RIN locus by next generation RNA sequencing

| PRJDB8261 | ENA

Solanum lycopersicum cultivar:Ailsa Craig

Project description:Solanum lycopersicum cultivar:Ailsa Craig Genome sequencing and assembly

| PRJNA507058 | ENA

Solanum lycopersicum cultivar:Ailsa Craig

Project description:Solanum lycopersicum cultivar:Ailsa Craig Transcriptome or Gene expression

| PRJNA1196094 | ENA

Solanum lycopersicum cultivar:Ailsa Craig

Project description:Solanum lycopersicum L. circRNA-seq

| PRJNA387236 | ENA

Solanum lycopersicum cultivar:Ailsa Craig

Project description:Solanum lycopersicum cultivar:Ailsa Craig Transcriptome or Gene expression

| PRJNA339195 | ENA

Solanum lycopersicum cultivar:Ailsa Craig

Project description:Solanum lycopersicum cultivar:Ailsa Craig Raw sequence reads

| PRJNA325868 | ENA

Solanum lycopersicum cultivar:Ailsa Craig

Project description:Solanum lycopersicum cultivar:Ailsa Craig Epigenomics

| PRJNA339196 | ENA

Solanum lycopersicum strain:Ailsa Craig

Project description:Solanum lycopersicum strain:Ailsa Craig Transcriptome or Gene expression

| PRJNA175249 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data