Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ScRNA-seq reveals the temporal dynamics of NK cells in subcutaneous MC38-Ova murine tumours

ABSTRACT: scRNA-seq reveals the temporal dynamics of NK cells in subcutaneous MC38-Ova murine tumours

PROVIDER: PRJNA912695 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22752814_1.fastq.gz	Fastqsanger.gz
	SRR22752814_2.fastq.gz	Fastqsanger.gz
	SRR22752815_1.fastq.gz	Fastqsanger.gz
	SRR22752815_2.fastq.gz	Fastqsanger.gz
	SRR22752816_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

scRNA-seq reveals the temporal dynamics of NK cells in subcutaneous MC38-Ova murine tumours

Project description:We combined scRNA-seq and a photoconvertible Kaede transgenic mouse tumour model to study the temporal dynamics of NK cells in murine tumours.

2023-12-15 | GSE221064 | GEO

scRNA-seq of myeloid cells from subcutaneous MC38-Ova tumours and draining lymph nodes (LN) in photoconvertible Kaede mice

Project description:scRNA-seq of myeloid cells from subcutaneous MC38-Ova tumours and draining lymph nodes (LN) in photoconvertible Kaede mice

| PRJNA914721 | ENA

RNA-seq of parental MC38 and anti-PD-1 resistant MC38 subcutaneous tumors

Project description:RNA-seq of parental MC38 and anti-PD-1 resistant MC38 subcutaneous tumors

| PRJNA747799 | ENA

scRNA-seq of myeloid cells from subcutaneous MC38-Ova tumours and draining lymph nodes (LN) in photoconvertible Kaede mice

Project description:We combined scRNA-seq and a photoconvertible mouse model to study the spatiotemporal dynamics of macrophages and dendritic cells (DCs) in murine tumours including their migration to the lymph node, including the effects of immune checkpoint therapy (anti-PD-L1).

2023-12-15 | GSE221513 | GEO

RNA-seq of parental MC38 and anti-PD-1 resistant MC38 subcutaneous tumors

Project description:MC38 tumors resistant to anti-PD-1 treatment (MC38-resistant) were generated through serial in vivo passaging, and global gene expression analysis was used to compare resistant and parental tumors. MC38 and MC38-resistant tumors exhibited widespread changes in global gene expression.

2021-07-22 | GSE180309 | GEO

Single-cell RNAseq of CD45 positive cells in MC38 tumors - Primary irradiated tumors and secondary non-irradiated tumors - Concurrent treatment with anti-PD-L1

Project description:Primary irradiated MC38 tumors and secondary MC38 non-irradiated tumors. Subcutaneous MC38 tumors in C57BL/6 mice Concurrent treatment with anti-PD-L1.

2023-10-15 | E-MTAB-13389 | biostudies-arrayexpress

Effect of rapamycin on murine subcutaneous MC38 tumor cell populations

Project description:To determine differential metabolic gene expression in distinct cell populations from subcutaneous MC38 tumors at baseline and in response to rapamycin, tumors from mice treated with vehicle or rapamycin were harvested, reconstituted to single cell suspensions, and flow sorted into cancer cell (CD45-), tumor-associated macrophage (TAM, CD45+ CD11b+ Ly6G- Ly6C lo F4/80 hi), monocytic myeloid-derived suppressor cell (M-MDSC, CD45+ CD11b+ Ly6G- Ly6C hi), CD8 T cell (CD45+ CD3+ CD8a+), and CD4 T cell (CD45+ CD3+ CD8a-) populations. RNA was extracted and transcripts were quantified by the NanoString nCounter Metabolic Pathways Panel.

2021-02-26 | GSE165223 | GEO

10x single cell RNA sequencing of intratumoral OTI T cells with Snx9 KO vs intergenic controls

Project description:10x 3' scRNA-seq analysis of intratumoral OTIs 13 days post adoptive transfer into C57BL/6 mice harboring a subcutaneous MC38-OVA tumor.

2022-11-07 | GSE210535 | GEO

Effect of rapamycin on murine subcutaneous MC38 tumor cell populations

Project description:Effect of rapamycin on murine subcutaneous MC38 tumor cell populations

| PRJNA693697 | ENA

Comparison of ILC1s and NK cells transcriptomes in subcutaneous tumor model

Project description:ILC1s are tissue-resident lymphocytes, their recruitment, migration and infiltration into subcutaneous tumors is a big concern. In addition, as NK cells and ILC1s are phenotypically similar, it is difficult to assess the relative contribution of these two cell types to anti-tumor function. Here, we compared the transcriptomes of ILC1s and NK cells from MC38 tumor-bearing mice to understand the biological/phenotypic changes of ILC1s.

2024-08-28 | GSE253918 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data