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Next generation sequencing of monkey ICSI, SCNT and TR placentas

ABSTRACT: Next generation sequencing of monkey ICSI, SCNT and TR placentas

PROVIDER: PRJNA915104 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR22874890.fastq.gz	Fastqsanger.gz
	SRR22874891.fastq.gz	Fastqsanger.gz
	SRR22874892.fastq.gz	Fastqsanger.gz
	SRR22874893.fastq.gz	Fastqsanger.gz
	SRR22874894.fastq.gz	Fastqsanger.gz

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Next generation sequencing of monkey ICSI, SCNT and TR placentas

Project description:Somatic cell nuclear transfer (SCNT) has been used to clone cynomolgus monkeys (Macaca fascicularis), but the cloning of other non-human primate species remains to be achieved. On the other hand, our histological examination indicated severe calcification of the placenta of SCNT fetuses. Additionally, we found that some of the maternal-biased imprinting genes were aberrantly lost in the cloned embryos by multi-omics analysis. We thus developed a trophoblast replacement (TR) method, providing an ICSI-derived placenta for the SCNT fetus, to support the full-term development of the cloned embryos after implantation. By combining this TR method with treatment with epigenetic modification factors, we obtained a healthy somatic cell cloned rhesus monkey. Thus, TR represents a useful approach for rhesus monkey cloning.

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Project description:Haploid cells are amenable for genetic analysis because they contain only one set of chromosomes. Here,we report the derivation of haESCs from monkey parthenogenic blastocysts. These cells, which we designated PG-haESCs (parthenogenic haploid embryonic stem cells), express classical ESC markers, are pluripotent, and can differentiate to different cell lines from all three embryonic germ layers in vivo and in vitro. We used microarrays to compare the gene expression levels among PG-haESC, ICSI-derived ESCs and female monkey somatic fibroblasts. We used ICSI-derived ESCs and somatic fibroblasts isloated from female individuals as control. Gene expression profiles of all the cell lines were analysed on an Affymetrix Rhesus Macaque array.

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