Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA-seq analysis of young adult daf-18(ok480) and control worms

ABSTRACT: RNA-seq analysis of young adult daf-18(ok480) and control worms

PROVIDER: PRJNA922122 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23024200_1.fastq.gz	Fastqsanger.gz
	SRR23024200_2.fastq.gz	Fastqsanger.gz
	SRR23024201_1.fastq.gz	Fastqsanger.gz
	SRR23024201_2.fastq.gz	Fastqsanger.gz
	SRR23024202_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

RNA-seq analysis of young adult daf-18(ok480) and control worms

Project description:RNA-seq analysis was used to identify the gene expression changes in male and hermaphroditie when daf-18 is lost. Based on these sequencing data, the genes that were up-regulated or down-regulated by at least 2 times (|log2 (folding change) | ≥ 1 and padj ≤ 0.05) were analyzed. The analysis of these differentially expressed genes' pathway and gene ontology (GO) enrichment shows that the influence of different genders after daf-18 deletion is enriched to some signal pathways, including longevity and protein degradation pathway in endoplasmic reticulum, etc.

2023-01-11 | GSE222447 | GEO

Whole genome microRNA expression profiling of long-lived daf-2(e1370) mutant in C. elegans at young adult stage

Project description:In order to get an insight into the complex interplay of miRNAs in insulin signaling, we profiled the small RNA polulation of daf-2(e1370) worms at young adult stage by Next Generation sequencing. We performed Next Generation sequencing to compare miRNA profiles of wild-type and long-lived daf-2(e1370) mutant at young adult stage

2014-11-27 | E-GEOD-61112 | biostudies-arrayexpress

Whole genome microRNA expression profiling of long-lived daf-2(e1370) mutant in C. elegans at young adult stage

2014-11-27 | GSE61112 | GEO

N2, daf-1(m40), and daf-1(m40);daf-3(mgDf90) adult, gravid hermaphrodites

Project description:total RNA from N2, daf-1(m40), and daf-1(m40);daf-3(mgDf90) adult, gravid hermaphrodites were extracted and sequenced.

2020-05-28 | GSE131997 | GEO

Adult C. elegans: Control daf-2 mutants treated with daf-16 RNAi vs. daf-2 mutants treated with empty vector RNAi

Project description:Transcriptional profiling of adult C. elegans comparing daf-16(-); daf-2(-) animals with adult daf-2(-) animals.

2010-01-01 | GSE18561 | GEO

Expression analysis of C. elegans DAF-15 neuronal AID worms

Project description:Investigation of whole genome gene expression level changes in C. elegans DAF-15 neuronal AID worms under 5-Ph-IAA treatment. This project contains 8 samples (4 treated by etoh and 4 treated by 5-Ph-IAA) of RNA-seq data.

2023-07-04 | GSE235948 | GEO

RNA-seq analysis of young adult fed 5mM tryptophan and control worms

Project description:RNA-seq analysis of young adult fed 5mM tryptophan and control worms

| PRJNA1092623 | ENA

N2, daf-1(m40), and daf-1(m40) daf-3(mgDf90) adult, gravid hermaphrodites

Project description:N2, daf-1(m40), and daf-1(m40) daf-3(mgDf90) adult, gravid hermaphrodites

| PRJNA545530 | ENA

C. elegans daf-10(m79) mutants vs wild-type worms

Project description:Transcriptional profiling of whole day 1 adult C. elegans, comparing animals carrying the m79 mutation in the daf-10 gene and wild-type isogenic animals. Genes that act downstream of sensory neurons to influence longevity, dauer formation and pathogen responses in Caenorhabditis elegans Manuscript abstract: Two-condition experiments, daf-10 vs wt, 3 biological repeats of each grown in parallel, verified lifespan increase in daf-10 mutant animals

2012-11-01 | E-GEOD-41943 | biostudies-arrayexpress

Adult Caenorhabditis elegans: wild-type (N2) and mir-243 mutant worms

Project description:Transcriptional profiling of N2 vs. mir-243 worms, aiming to identify direct and indirect targets of the microRNA. N2 and mir-243 young-adult worms grown at 20C were analyzed. Three biological replicates with dye-swaps were performed.

2011-09-15 | E-GEOD-20558 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data