Project description:We isolated an efficient doxycycline degrading strain Chryseobacterium sp. WX1. To investigate gene expression patterns during doxycyclinedegradation by strain WX1, we conducted a comparative transcriptomic analysis using cultures of strain WX1 with and without doxycycline addition. The RNA-Seq data revealed that 90.44-96.56% of the reads mapped to the genome of Chryseobacterium sp. WX1 across all samples. Differentially expressed genes (DEGs) analysis (|log2FC| >2; p < 0.01) showed that 693 genes were significantly up-regulated and 592 genes were significantly down-regulated.

2023-09-12 | GSE242785 | GEO

Agrobacterium tumefaciens 5A strain:5A

Project description:Agrobacterium tumefaciens 5A strain:5A Genome sequencing and assembly

| PRJNA75079 | ENA

Proteomic data on the biodegradation of doxycycline by Chryseobacterium sp. WX1

Project description:In this study, we isolated a potent doxycycline-degrading bacterium, Chryseobacterium sp. WX1, from environmental samples. To elucidate the molecular mechanisms underlying doxycycline degradation by strain WX1, we assessed and interpreted the proteomic profiles of Chryseobacterium sp. WX1 under conditions both with and without doxycycline exposure.

2023-09-07 | PXD045182 | Pride

Colletotrichum camelliae

Project description:Colletotrichum camelliae Genome sequencing

| PRJNA628751 | ENA

Ciborinia camelliae strain:ITAC2

Project description:Ciborinia camelliae strain:ITAC2 Genome sequencing and assembly

| PRJNA853157 | ENA

Aeromicrobium camelliae strain:YS17T

Project description:Aeromicrobium camelliae strain:YS17T Genome sequencing and assembly

| PRJNA506632 | ENA