Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Daily temporal homeostasis in the coral Acropora digitifera

PROVIDER: PRJNA922686 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23047206.fastq.gz	Fastqsanger.gz
	SRR23047207.fastq.gz	Fastqsanger.gz
	SRR23047208.fastq.gz	Fastqsanger.gz
	SRR23047209.fastq.gz	Fastqsanger.gz
	SRR23047210.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 39

Similar Datasets

Acropora digitifera stinging cells toxins

Project description:Analysis of toxins from stinging cells of coral Acropora digitifera.

2015-07-21 | MSV000079199 | MassIVE

Deciphering the nature of the coral-Chromera association

Project description:Since the discovery of Chromera velia as a novel coral-associated microalga, this organism has attracted interest because of its unique evolutionary position between the photosynthetic dinoflagellates and the parasitic apicomplexans. The nature of the relationship between Chromera and its coral host is controversial. Is it a mutualism, from which both participants benefit, or is Chromera a parasite, harming its host? To better understand the interaction, larvae of the common Indo-Pacific reef-building coral Acropora digitifera were experimentally infected with Chromera and the impact on the host transcriptome assessed at 4, 12, and 48 h post-infection using Illumina RNA-Seq technology. The transcriptomic response of the coral to Chromera was complex and implies that host immunity is strongly suppressed, and both phagosome maturation and the apoptotic machinery modified. These responses differ markedly from those described for infection with a competent strain of the coral symbiont Symbiodinium, instead resembling those of vertebrate hosts to parasites and/or pathogens such as Mycobacterium tuberculosis. Consistent with ecological studies suggesting that the association may be accidental, the transcriptional response of A. digitifera larvae leads us to conclude that Chromera is more likely to be a coral parasite, commensal, or accidental bystander, but certainly not a beneficial mutualist

2017-08-16 | GSE102664 | GEO

Acropora digitifera

Project description:Demystifying broadcast coral spawning in Acropora digitifera

| PRJNA316795 | ENA

Acropora digitifera

Project description:Functional analysis of Brachyury in the coral Acropora digitifera

| PRJDB4579 | ENA

Acropora digitifera

Project description:Diversity of endosymbiotic dinoflagellates of a coral Acropora digitifera.

| PRJDB17154 | ENA

Acropora digitifera

Project description:Intraspecific variability of coral Acropora digitifera using ezRAD analysis.

| PRJDB13832 | ENA

Microarray studies of darkness stress and bleaching in the Caribbean corals Acropora palmata and Montastraea

Project description:This SuperSeries is composed of the following subset Series: GSE27022: Microarray studies of darkness stress and bleaching in the Caribbean coral Acropora palmata GSE27024: Microarray studies of darkness stress and bleaching in the Caribbean coral Montastraea faveolata Refer to individual Series

2011-03-22 | E-GEOD-27025 | biostudies-arrayexpress

Acropora digitifera

Project description:Acropora digitifera overview

| PRJNA71437 | ENA

Molecular response of the coral Acropora millepora to three settlement and/or metamorphosis induced stimuli

Project description:Two known settlement/metamorphosis inducing stimuli (crustose coralline algae, and ethanolic extract of crustose coralline algae) and one stimulus which just induces metamorphosis (LWamide) were used to stimulate competent planula larvae of the coral Acropora millepora. Samples were taken 0.5h, 4h and 12h post induction isolate the genes controlling settlement and metamorphosis in this coral.

2009-12-07 | GSE11709 | GEO

The host transcriptome remains unaltered during the establishment of coral-algal symbioses

Project description:Coral reefs are based on the symbiotic relationship between corals and photosynthetic dinoflagellates of the genus Symbiodinium. We followed gene expression of coral larvae of Acropora palmata and Montastraea faveolata after exposure to Symbiodinium strains that differed in their ability to establish symbioses. We show that the coral host transcriptome remains almost unchanged during infection by competent symbionts, but is massively altered by symbionts that fail to establish symbioses. Our data suggest that successful coral-algal symbioses depend mainly on the symbionts' ability to enter the host in a stealth manner rather than a more active response from the coral host.

2009-04-01 | GSE14923 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data