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Medicago truncatula cultivar:R108

ABSTRACT: bHLH/HLH heterodimer controls the patterning of peripheral vascular strand development in Medicago truncatula nodules.

PROVIDER: PRJNA923119 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR23072259_1.fastq.gz	Fastqsanger.gz
	SRR23072259_2.fastq.gz	Fastqsanger.gz
	SRR23072260_1.fastq.gz	Fastqsanger.gz
	SRR23072260_2.fastq.gz	Fastqsanger.gz
	SRR23072261_1.fastq.gz	Fastqsanger.gz

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Medicago truncatula

Project description:bHLH/HLH heterodimer controls the patterning of peripheral vascular strand development in Medicago truncatula nodules.

| PRJNA1061331 | ENA

Medicago truncatula R108 in symbiosis with rhizobia wt or rhizobia mutant for BacA. Comparison of the transcriptomic response of Medicago truncatula plants.

Project description:12plex_medicago_2013-08 - r108 in symbiosis with rhizobia wt or rhizobia mutant for baca. - Two experiments to compare the transcriptomic response of medicago plants: Agar medium versus Phytagel medium (exp1) and rhizobium WT versus BacA (exp2). - Medicago truncatula ecotype R108 was inoculated with the symbiotic rhizobium Sinorhizobium meliloti strain Sm1021 and with its derivative mutant delta bacA. Nodules were collected 13 days after inoculation, and RNA were prepared for transcriptome analysis, there were three biological independant experiements.

2018-11-01 | GSE121775 | GEO

Cell- and tissue-specific transcriptome analyses of Medicago truncatula root nodules

2013-05-29 | GSE43354 | GEO

Medicago truncatula R108: permissive medium versus non permissive medium. Comparison of the transcriptomic response of medicago truncatula plants.

Project description:12plex_medicago_2013-08 - r108 permissive medium versus non permissive medium. - Two experiments to compare the transcriptomic response of medicago plants: Agar medium versus Phytagel medium (exp1) and rhizobium WT versus BacA (exp2). - Medicago truncatula R108 seedlings were inoculated with S. medicae WSM419 and were cultivated during three days on buffered nidulation medium solidified with Phytagel or Agar.

2018-11-01 | GSE121771 | GEO

transcriptome of medicago nodule 6 dpi adn 15 dpi

Project description:Peripheral vascular strand development in nodules is controlled by a bHLH/HLH heterodimer

| PRJEB72299 | ENA

Nodule Zone Specific Proteome - Integrated analysis of zone-specific protein and metabolite profiles within nitrogen-fixing Medicago truncatula-Sinorhizobium medicae nodules

Project description:Root nodules of the medicago truncatula-sinorhizobium meliloti plant-bacterail symbiotic model system were hand sectioned followed by LCMS. Sections were made to separate different developmental zones along the nodules longitudinal axis.

2017-07-17 | PXD006683 | Pride

Medicago truncatula cultivar:truncatula

Project description:Transcriptome of Medicago truncatula truncatula Nodules - 012-I07

| PRJNA427037 | ENA

Medicago truncatula cultivar:truncatula

Project description:Transcriptome of Medicago truncatula truncatula Nodules - 012-I09

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Medicago truncatula cultivar:truncatula

Project description:Transcriptome of Medicago truncatula truncatula Nodules - 012-I08

| PRJNA427038 | ENA

Cell- and tissue-specific transcriptome analyses of Medicago truncatula root nodules

Project description:We used laser-capture microdissection (LCM) to isolate specific cells from the Medicago truncatula nodule meristem (M), the distal infection (DIZ), the proximal infection zone (PIZ), infected cells (IC) and uninfected cells (UIC) from the fixation zone. Based on Medicago GeneChips, we identified the cell- and tissue-specific programm of gene expression in Medicago truncatula root nodules. Nodules were harvested three weeks after inoculation of Medicago truncatula (genotype Jemalong A17) plants with Sinorhizobium meliloti strain 2011. Nodules were fixed in Farmer's fixative and subsequently embedded in paraffin. 8 M-BM-5m de-paraffined sections were used to capture cells from the nodule meristem, distal infection zone, proximal infection zone, infected cells and uninfected cells from the fixation zone, using an Arcturus Pixcell II laser capture microscope. 3 biological replicates were used for each cell-/tissue type. After RNA extraction, the RNA was amplified and used for Medicago Gene Chip hybridization.

2013-05-29 | E-GEOD-43354 | biostudies-arrayexpress

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