Project description:16S rDNA amplicon sequences of metagenomes extracted from Pasig River, Metro Manila, Philippines,
| PRJNA923167 | ENA
Project description:16S rDNA amplicon sequences of metagenomes extracted from aqueduct water samples collected in Metro Manila, Philippines
| PRJNA1034223 | ENA
Project description:16S rDNA amplicon sequences of metagenomes extracted from drinking water samples collected in Metro Manila, Philippines
| PRJNA922507 | ENA
Project description:16S rDNA amplicon sequences of metagenomes extracted from deep well water samples collected in Mega Manila, Philippines
| PRJNA1036564 | ENA
Project description:16S rDNA amplicon sequences of metagenomes extracted from before and after treatment plant water samples collected in Mega Manila, Philippines
| PRJNA1036128 | ENA
Project description:Metagenome sequences from pre-treatment plant water samples collected in Metro Manila, Philippines
| PRJNA1037287 | ENA
Project description:Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 variants from Metro Manila, Philippines
Project description:This experiment was annotated by TAIR (http://www.arabidopsis.org). In this experiment we examined whole genome response to herbicidal levels of 2,4-D application. Arabidopsis plants (14 days) grown in vitro on MS medium in petri dishes were flooded with 1 mL stock of 2,4-D to enable root uptake. Plants were treated with 1.0 mM 2,4-D for a period of 1 hour immediately after which RNA was extracted and used for the microarray based experiments. the goal of this study was to explore the herbicidal mode of action of auxinic herbicide 2,4-D. Experimenter name = Chitra Raghavan Experimenter department = Trevor Stevenson Laboratory Experimenter institute = IRRI Experimenter address = Entomology and Plant Pathology Division IRRI Experimenter zip/postal_code = Manila 4031 Experimenter country = Philippines Keywords: compound_treatment_design
Project description:This experiment was annotated by TAIR (http://www.arabidopsis.org). In this experiment we examined whole genome response to herbicidal levels of 2,4-D application. Arabidopsis plants (14 days) grown in vitro on MS medium in petri dishes were flooded with 1 mL stock of 2,4-D to enable root uptake. Plants were treated with 1.0 mM 2,4-D for a period of 1 hour immediately after which RNA was extracted and used for the microarray based experiments. the goal of this study was to explore the herbicidal mode of action of auxinic herbicide 2,4-D. Experimenter name = Chitra Raghavan; Experimenter department = Trevor Stevenson Laboratory; Experimenter institute = IRRI; Experimenter address = Entomology and Plant Pathology Division IRRI; Experimenter zip/postal_code = Manila 4031; Experimenter country = Philippines Experiment Overall Design: 3 samples were used in this experiment
Project description:A ELMSeq reporter cassette was created to monitor Dam levels by methylation, and introduced in the genome. Some regions upstream dam were randomized to see their effect on gene expression. So the cassette consists in: 4xGATC sites - (promoter) - random region - dam. The amplicon was spanning the whole cassette, including some bases inside the dam. The cassette was introduced in Mycoplasma pneumoniae.