Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Feces metagenome

ABSTRACT: Fecal 16S rRNA amplicon data derived from wild bank voles (Myodes glareolus) in Central-Finland Raw sequence reads

PROVIDER: PRJNA933136 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23435700_1.fastq.gz	Fastqsanger.gz
	SRR23435700_2.fastq.gz	Fastqsanger.gz
	SRR23435701_1.fastq.gz	Fastqsanger.gz
	SRR23435701_2.fastq.gz	Fastqsanger.gz
	SRR23435702_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 256

Similar Datasets

Glareosin: a novel sexually dimorphic urinary lipocalin in the bank vole, Myodes glareolus, C4PR_LIV

Project description:The urine of bank voles (Myodes glareolus) contains substantial quantities of a small protein that is expressed at much higher levels in males than females, and at higher levels in males in the breeding season. This protein was purified and completely sequenced at the protein level by mass spectrometry. Leucine/isoleucine ambiguity was completely resolved by metabolic labelling, monitoring the incorporation of dietary deuterated leucine into specific sites in the protein. The predicted mass of the sequenced protein was exactly consonant with the mass of the protein measured in bank vole urine samples, correcting for the formation of two disulphide bonds. The sequence of the protein revealed that it was a lipocalin related to aphrodisin and other odorant binding proteins (OBPs), but differed from all OBPs previously described. The pattern of secretion in urine used for scent marking by male bank voles, and similarity to other lipocalins used as chemical signals in rodents, suggest that this protein plays a role in male sexual and/or competitive communication. We propose the name glareosin for this novel protein to reflect the origin of the protein and to emphasise the distinction from known OBPs.

2017-09-13 | PXD006645 | Pride

Project description:Amplicon seq of innate immunity genes in bank vole Myodes glareolus

| PRJNA395763 | ENA

Myodes glareolus

Project description:Bank vole Myodes glareolus Genome sequencing and assembly

| PRJNA335935 | ENA

Myodes glareolus

Project description:Myodes glareolus overview

| PRJNA83991 | ENA

Bacterial extracellular vesicles of human amniotic fluid and maternal feces

Project description:Fecal and amniotic fluid samples were collected from 25 pregnant women undergoing elective Caesarean section delivery after a term pregnancy at Oulu University Hospital, Oulu, Finland. Extracellular vesicles (EVs) were isolated from both sample types and their protein cargo analyzed using LC-ESI-MS/MS.

2023-11-14 | PXD045755 | Pride

Myodes glareolus isolate:Ukr

Project description:Myodes glareolus Chernobyl Transcriptome

| PRJNA485692 | ENA

Project description:Environmental radiation alters the gut microbiome of the bank vole Myodes glareolus

| PRJEB22579 | ENA

Impact of fecal microbiota transplantation (FMT) in 3 days-ABX-treated recipient mice using feces from 6 NSCLC patients at diagnosis.

Project description:This study aimed to analyze changes in gut microbiota composition in mice after transplantation of fecal microbiota (FMT, N = 6) from the feces of NSCLC patients by analyzing fecal content using 16S rRNA sequencing, 10 days after transplantation. Specific-pathogen-free (SPF) mice were used for each experiments (N=4) as controls.

2023-07-01 | E-MTAB-12812 | biostudies-arrayexpress

Myodes glareolus TCRβ repertoire

Project description:Qualitative and quantitative description of the TCRβ repertoire in bank vole (Myodes glareolus)

| PRJEB22487 | ENA

Bank vole genome assemblies

Project description:Assembly of two bank vole (Myodes glareolus) genomes assembled using 10x linked reads.

| PRJEB34572 | ENA