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Transcriptome analysis of Arabidopsis thaliana and Lotus japonicus exposed to arbuscular mycorrhizae

ABSTRACT: Transcriptome analysis of Arabidopsis thaliana and Lotus japonicus exposed to arbuscular mycorrhizae

PROVIDER: PRJNA934345 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR23445700.fastq.gz	Fastqsanger.gz
	SRR23445701.fastq.gz	Fastqsanger.gz
	SRR23445702.fastq.gz	Fastqsanger.gz
	SRR23445703.fastq.gz	Fastqsanger.gz
	SRR23445704.fastq.gz	Fastqsanger.gz

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Transcriptome analysis of Arabidopsis thaliana and Lotus japonicus exposed to arbuscular mycorrhizae

Project description:Key genes involved in symbiosis have been lost in nonmycorrhizal plants such as Arabidopsis thaliana. We studied the effects on gene expression in A. thaliana expressing an abbreviated, functional version of one of genes, the transcription factor Interacting Protein of DMI3 (IPD3-min), under low nutrient conditions in the presence and absence of a mycorrhizal fungi, Rhizophagus. We conducted the same transcriptome analysis with a cyclops-4 knockout mutant in Lotus japonicus to compare with the expression profile of a mycorrhizal host model lacking IPD3.

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